Paenibacillus sp. FSL R7-0273: R70723_11470
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Entry
R70723_11470 CDS
T03356
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
paea
Paenibacillus sp. FSL R7-0273
Pathway
paea03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
paea00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
R70723_11470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
paea03019
]
R70723_11470
03009 Ribosome biogenesis [BR:
paea03009
]
R70723_11470
Enzymes [BR:
paea01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
R70723_11470
Messenger RNA biogenesis [BR:
paea03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
R70723_11470
Ribosome biogenesis [BR:
paea03009
]
Prokaryotic type
rRNA helicases
R70723_11470
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
AAA_19
AAA_30
CMS1
Helicase_RecD
MatB
Motif
Other DBs
NCBI-ProteinID:
AIQ46425
UniProt:
A0A089KFA2
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All DBs
Position
2601458..2603113
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AA seq
551 aa
AA seq
DB search
MKTFAEFGLEPKVLQAITELGFEESTPIQEQAIPIALTGADMIGQAQTGTGKTAAFGIPL
ISKISREDEKITALVMTPTRELAIQVAEEIGKLSRFKGLRSLAIYGGQDIGRQIRGLKKK
PQIIIGTPGRLLDHINRKTIRLDDVQTVVLDEADEMLDMGFMEDIQSILKLVPEERQTML
FSATMPPNIQRLAQQFLKNPQHVSVIPKQISAPLIDQAYIEVPERQKFEALSRLIDMESP
ELAIVFGRTKRRVDELAEGLQKRGYSADGLHGDLSQNQRDAVMRKFRDGSIDVLVATDVA
ARGLDVSGVTHVINFDLPQDPESYVHRIGRTGRAGKEGTAWSFVTPREMDHLHLIERVTR
HRITRKPLPTMAEAIEGKQRITAERLLAMVEAGELNEYKGIAIQLLEQYDSVQLLSAAMK
LLTGDSKDAQVELTPEDPIRAKRRGGKYDIRSGRKPNGGYGGNRSGGGGGYKGNREGGNR
EGGSYGGGYKGNRDNSSGGTTRGGYSSGYGGNSSSGGYKGNRDDAGRSSDRKPYSRPSGT
STRPAKDYDNN
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaacattcgcagaattcggcttggagccaaaagtgcttcaagcaatcacagagcta
ggatttgaggaatcaacaccgattcaggagcaggcgattccaatcgcgctgactggagcg
gacatgatcggccaggctcagacaggtaccggtaaaaccgctgccttcggtattcctctt
atctccaaaatctcccgggaagatgaaaaaatcacggcgctcgtaatgacgcctacccgc
gagctggctattcaggttgctgaagaaatcggcaagctgtcccgcttcaaaggtcttcgt
tccctggccatctacggcggacaggatattggacgccagatccgcggcttgaagaagaaa
ccgcagattatcatcggtacaccgggccgtctcctggatcacatcaaccgcaagaccatc
cgtctggacgacgtacagaccgttgtactggatgaagcagatgaaatgctggatatgggc
ttcatggaagatatccagtccatcctcaagctggttccggaagagcgccaaaccatgctg
ttctcagcgactatgcctcctaatattcaacgtcttgcccagcagttcctgaagaacccg
cagcatgtatcggttattcctaagcagatcagcgcacctctgattgaccaggcttatatc
gaagttcctgagcgtcagaagttcgaggcgttgagccgtttgatcgatatggaatcccct
gagctggcaattgtcttcggccgcacaaagcgccgtgtagacgagcttgctgaaggtctc
cagaaacgcggctactccgctgacggactgcacggcgacctgtcgcagaaccagcgcgac
gctgttatgcgcaaattccgcgacggcagcatcgatgtcctcgtagcaacagacgttgca
gcacgcggtctcgacgtatccggtgtaacgcatgtaattaactttgaccttccgcaggat
cctgagagctatgtacaccgtatcggccgtacaggccgtgcaggtaaagagggtacagcc
tggtcgttcgtaactccgcgcgaaatggatcatctgcatctgatcgagcgtgttacgcgc
caccgtattacccgcaagccgcttcctacaatggccgaggctatcgaaggtaaacaacgc
attacagctgaacgcttgctggcaatggttgaagcaggcgaattgaacgaatacaaagga
attgcaatccagcttctggagcaatacgattccgtgcagcttctctccgcagcaatgaaa
ttgcttacgggcgattccaaggatgcacaggttgaattgacacctgaggatccgatccgc
gctaaacgccgcggcggcaaatacgatatccgcagcggacgcaagccgaacggcggatat
ggcggcaaccgttccggcggcggtggcggctacaaaggtaaccgtgaaggcggcaaccgt
gaaggcggaagctacggcggcggctataaaggcaaccgcgataatagctccggcggcaca
acgcgcggcggctacagcagcggctacggcggcaacagcagcagcggaggctacaagggc
aaccgtgatgatgccggccgcagctccgaccgcaagccttactcacgtcctagcggcaca
agcacacgtcctgccaaggattacgacaacaactaa
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