Paenibacillus sp. FSL R7-0273: R70723_25375
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Entry
R70723_25375 CDS
T03356
Name
(GenBank) helicase UvrD
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
paea
Paenibacillus sp. FSL R7-0273
Pathway
paea03420
Nucleotide excision repair
paea03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
paea00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
R70723_25375
03430 Mismatch repair
R70723_25375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paea03400
]
R70723_25375
Enzymes [BR:
paea01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
R70723_25375
DNA repair and recombination proteins [BR:
paea03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
R70723_25375
MMR (mismatch excision repair)
Other MMR factors
R70723_25375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C_2
UvrD_C
AAA_19
AAA_30
Viral_helicase1
DEAD
PhoH
SLFN-g3_helicase
ResIII
NACHT
T2SSE
nSTAND3
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AIQ48868
UniProt:
A0A089KPL0
LinkDB
All DBs
Position
complement(5665943..5668144)
Genome browser
AA seq
733 aa
AA seq
DB search
MEDNFQSAYQEEEDRLNSTLTEIDSILTRLKSTPVYTGHDYTEQVLEDSREQRRKDLAKL
VHEPYFGRLDFQGSGEGEARPLYIGKIGVDREQVSDRPLVIDWRAPVASLFYSFTGGTEP
ASYEAPEGLIEGLVYLKRNVVIRKQILERVADTYNRNSDAPTVSDEFLVYRLGENKDNRL
RDIVSTIQEEQDRIIRAVKNTALIIQGVAGSGKTTVALHRLAFLLYQYKEQVSAERMIIF
APNRMFLDYISDVLPELGVGNIAQSTFPDWAAAVLSLELPEQNAAETLNRWFEAEGGMPA
ITEETPGRFKGSTVLMEVIESAVRQLETGAVPEGDFIPWEGAVLRRSMILRWHNEEYAPY
PPLKRKERVMARIHRWIEMELKKSPSAAALKERKKKAAAREKTYSGKWPKYNPLMIYKQI
FRAAKVPEDWPAEAPELIPQGVLKETVKELKKGILREEDLPPLLYIHYLLSGNEGTERFD
HIVIDEAQDFSPFQIAVLDLYVKGHSFTILGDLSQGIHAYKGVHEWSEMSTLFAPEHTAY
HALTRSYRSTMEIIEFANGILSAGVQSPLLAVPVFRSGNPVRLIDYSGEAPKAASGASQR
LNAVRAALASLSGREYRTVAVLTRSLREAEELYAELGAHFADLHLIDGSMTEYHGGLSVL
PVYLSKGLEFDAVILADADTGHYGEAAWDAKLMYVGCTRALHELWLLHGGDLPAYVQTAG
EETVSGWPEPAAR
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
ttggaggacaactttcaaagtgcctatcaagaggaagaagacaggctgaacagcacgctt
accgaaattgattcgatccttacaagacttaagagcaccccggtgtacacaggacacgat
tatacggaacaggtgctggaggattcaagagagcagcggcgcaaggatctggccaagctc
gtgcacgagccttatttcggccgtcttgactttcagggcagcggtgagggggaagcccgg
ccgctctatatcggcaaaatcggcgtggaccgcgagcaggtaagcgaccgtccgctggtc
atcgactggcgtgcaccggtagcaagcctgttctattcattcaccggcggaaccgagcct
gcctcgtatgaagctccggagggcctgatcgaagggcttgtgtatcttaagcgcaatgtg
gtgatccgcaagcagattctggaacgggttgcggatacatacaaccggaacagcgatgcg
cctaccgtgtcagatgaatttctagtctaccggctgggcgagaacaaggataaccggctc
cgcgatatcgtctcgacgattcaggaggagcaggacaggattatccgtgcggtaaagaat
acggcgctgatcatccagggggtagcgggcagcggtaaaactacggtcgccctgcaccgg
ctggctttcctgctgtatcaatacaaggagcaggtttcggcagagagaatgattatattt
gccccgaaccggatgttcctggattatatctccgatgtgctgccggagcttggggtgggt
aacattgcccaaagcaccttcccggactgggcggcggctgtactgagcctggagctgcct
gagcagaatgcggcggagacgctgaaccggtggtttgaggccgagggcggcatgccggct
ataacggaagaaacgccgggacgcttcaagggttctacagtgctgatggaagtgattgag
tcggctgtcagacagctggaaaccggagcggttcccgaaggggatttcattccgtgggaa
ggcgctgtgctgcgccgctcgatgatcctgcgctggcataatgaggaatacgctccctat
ccgccgctgaagcgcaaggaacgggtgatggcgcggatccaccgctggatcgagatggag
ctgaagaagagtccgtctgcggctgccctgaaggaacggaagaagaaggctgccgcccgg
gagaaaacctacagcggtaaatggccgaagtataatccgctgatgatttacaagcagatt
ttccgcgcagccaaggtgcctgaggactggccggctgaagcgccggagctgattccgcag
ggtgtgcttaaagaaaccgtgaaggagctcaaaaaaggcattctgcgcgaagaagacctg
cctccgctgctctatatccattatctgctcagcggcaatgaggggacagagcgctttgac
catatcgtaattgatgaagcacaggatttctcgcctttccagattgctgtgctggattta
tatgtgaaagggcactccttcaccatcctcggtgatttatcacagggaatccatgcgtat
aaaggagtgcacgaatggtctgaaatgtcgaccctgttcgctcctgagcatacagcttat
catgcgctgacgcgaagctaccgctcaacaatggagatcattgaattcgccaacggtatc
ctttcagccggcgtacagagcccgctgctggctgtgccggtgttccgcagcggtaatccg
gtccgtctgatcgattacagcggtgaagcgcctaaggctgcctcaggagcctctcagcgc
ctgaacgcagtcagagcggcgctggcttcactctccgggcgtgaataccgcacagtggct
gtgttgacccgcagtctgcgcgaagcagaggagctgtacgctgagctgggagcccatttc
gcggatctccatcttattgacgggagtatgacagagtatcacggcgggctgtcggtgctg
cccgtctatctgtccaagggactggagttcgacgctgtcattctggcggatgcggacaca
ggccattacggggaagcagcctgggatgcgaagctgatgtatgtcggctgcacccgtgcg
ctgcatgaattgtggctgctgcatggcggggacctgcctgcctatgtgcagacagcaggg
gaagagaccgtctccggctggccggagcccgcagcccggtaa
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