Pseudomonas aeruginosa NCGM 1900: NCGM1900_6222
Help
Entry
NCGM1900_6222 CDS
T03789
Symbol
betA
Name
(GenBank) choline dehydrogenase
KO
K00108
choline dehydrogenase [EC:
1.1.99.1
]
Organism
paeb
Pseudomonas aeruginosa NCGM 1900
Pathway
paeb00260
Glycine, serine and threonine metabolism
paeb01100
Metabolic pathways
Module
paeb_M00555
Betaine biosynthesis, choline => betaine
Brite
KEGG Orthology (KO) [BR:
paeb00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
NCGM1900_6222 (betA)
Enzymes [BR:
paeb01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.99 With unknown physiological acceptors
1.1.99.1 choline dehydrogenase
NCGM1900_6222 (betA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GMC_oxred_N
GMC_oxred_C
Lycopene_cycl
NAD_binding_8
Pyr_redox_2
FAD_binding_2
DAO
Thi4
Motif
Other DBs
NCBI-ProteinID:
BAP25276
LinkDB
All DBs
Position
complement(6587061..6588746)
Genome browser
AA seq
561 aa
AA seq
DB search
MSQEFDYIIIGAGSAGNVLATRLTEDADVSVLLLEAGGPDYRFDFRTQMPAALAFPLQGR
RYNWAYETDPEPYMNNRRMECGRGKGLGGSSLINGMCYIRGNALDFDGWAKEPGLEDWSY
LDCLPYFRKAETRDIGPNDYHGGDGPVSVTTPKAGNNPLFHAMVEAGVQAGYPRTDDLNG
YQQEGFGPMDRTVTPEGRRAATGRGYLDQARGRPNLTIVTHALSDRILFSGKRAIGVSYL
VGNGDNPATAHARREVLVCSGAIASPQLLQRSGVGPAALLRDLDIPVVHDLPGVGANLQD
HLELYLQYACKQPVSIYPATKWWNQPAIGAQWLFLGKGLGASNQFEAGGFIRTREAFEWP
NIQFHFLPVAINYNGSKGVQEHGFQAHMGSMRSPSRGRIHLKSRDPRQHPSILFNYMSHE
QDWQEFRDGIRLTREIMNQPALDPYRGRELSPGVNVQSDAELDEFIRNHAETAFHPSCSC
KMGSDDMAVVDGQGRVHGMEGLRVVDASIMPLIITGNLNATTIMMAEKIADRIRGRQPLP
RSTAKYYVAGDAPVRGNPVRA
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaggaattcgactacatcatcatcggagccggctctgccggtaacgtactcgct
acccgcctcaccgaagatgccgacgtcagcgtcctgctgctcgaagccggcggtcccgac
taccgcttcgacttccgcacccagatgccggcggcccttgccttcccgctgcaggggcgg
cgctacaactgggcctacgagaccgaccccgagccctacatgaacaaccgccgcatggag
tgcggtcgcggcaagggcctgggcggctcctcgctgatcaacggcatgtgctatatccgc
ggcaacgccctggacttcgacggctgggccaaggagccgggcctcgaggactggagctac
ctcgattgcctgccgtacttccgcaaggcggaaacccgggacatcggccccaacgactac
catggcggcgacggcccggtcagcgtgaccacgccgaaggccggcaacaacccactgttc
catgcgatggtcgaggccggcgtgcaggccggctacccgcgaaccgatgacctcaacggc
taccagcaggaaggcttcggccccatggaccggaccgtcaccccggagggccgtcgcgcc
gccaccgggcgcggctacctggaccaggcccgcggccggcccaacctgaccatcgtcacc
cacgccctgagcgaccgcatcctgttcagcggcaaacgcgctatcggcgtctcctacctg
gtgggcaacggcgacaacccggccaccgcccacgcccgccgcgaagtattggtgtgcagc
ggcgcgatcgcctcgccgcaattgctgcaacgctccggcgtcggcccggcggccctgctg
cgcgacctggacatcccggtggtgcatgacctgccgggcgtcggcgccaacctgcaggat
cacctggaactctacctgcagtacgcctgcaagcagccggtgtcgatctacccggcgacc
aaatggtggaaccagcctgccatcggtgcccagtggctgttcctcggcaagggcctcggc
gccagcaaccagttcgaggctggcggcttcatccgaacccgcgaagcgttcgaatggccg
aacatccagttccatttcctcccggtggcgatcaactacaacggcagcaagggcgtgcag
gagcacggcttccaggcgcacatgggctcgatgcgctcgccgagccgcgggcgcatccac
ctgaagtccagggacccgcgccagcatccgagcatcctgttcaactacatgtcccacgag
caggactggcaggagttccgcgacggcatccggctgacccgcgagatcatgaaccagccg
gcgctggacccctatcggggccgcgagttgagcccaggggtgaacgtgcagtcggacgcc
gaactcgacgagttcatccgcaaccatgcggagaccgctttccacccatcctgctcgtgc
aagatgggcagcgacgacatggcggtggtcgatggccagggacgggtccacggcatggaa
ggactgcgagtggtggatgcgtcgatcatgccgctgatcatcaccggcaacctcaatgcc
accaccatcatgatggccgagaagatcgccgacaggatccgcggtcgccagccgctgccg
cgcagcacggcgaagtactacgtggccggggatgcgccggtacgcggcaaccccgtgcgg
gcctga
DBGET
integrated database retrieval system
