Paenibacillus sp. FSL R5-0345: R50345_27995
Help
Entry
R50345_27995 CDS
T03333
Name
(GenBank) RNA polymerase factor sigma-70
KO
K27000
RNA polymerase sigma-H factor
Organism
paef
Paenibacillus sp. FSL R5-0345
Brite
KEGG Orthology (KO) [BR:
paef00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
paef03021
]
R50345_27995
Transcription machinery [BR:
paef03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
R50345_27995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
GerE
HTH_23
HTH_16
HTH_38
Sigma70_ECF
Sigma70_r4
HTH_30
HTH_28
HTH_36
UPF0122
HTH_29
Terminase_5
ACDC
Motif
Other DBs
NCBI-ProteinID:
AIQ38107
LinkDB
All DBs
Position
complement(6138711..6139355)
Genome browser
AA seq
214 aa
AA seq
DB search
MSVDLKEIMLSEYDFISDEDIVEAFRGGDSGALEHLINKYRNFVRAKARSYFLIGADRED
IVQEGMIGLYKAIRDFKGDKLSSFKAFAELCITRQIITAIKTATRQKHIPLNSYVSLDKP
IYDEDSDRTLMDVICGTQVLDPEELIINQEEFIGLEDKMAEILSDLERKVLMLYLDGRSY
QEIAEDLKRHVKSIDNALQRVKRKLERYLEVRDN
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgtcgacctcaaggaaataatgctgtctgagtatgatttcataagtgatgaagat
attgtcgaggctttccgtggtggcgacagtggcgcattggaacacttaattaataaatac
cgtaattttgtacgtgctaaagcccgctcttatttcttgatcggggcagaccgtgaagat
attgttcaagaaggaatgattggtctatataaggctattcgtgactttaaaggtgacaag
ctctcttcatttaaagcttttgctgagctctgcattacacgtcaaattataaccgctatt
aagacggccactcgtcagaagcatattccgctcaattcttatgtttctttggacaagccc
atttatgatgaagattctgaccgaacgcttatggatgtcatttgtggaactcaggttcta
gatccagaagaactaattattaatcaagaagaattcattggacttgaagataagatggca
gagattttaagtgacctagagcgtaaggttctaatgctgtacttagacggaagatcttat
caggaaattgctgaagatctaaagaggcatgtgaaatctattgacaacgctttacaacgt
gtaaagcggaaattagaaagatatctagaagtgcgcgacaattaa
DBGET
integrated database retrieval system
