Paenibacillus sp. FSL R5-0912: R50912_14750
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Entry
R50912_14750 CDS
T03334
Name
(GenBank) helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
paeq
Paenibacillus sp. FSL R5-0912
Pathway
paeq03022
Basal transcription factors
paeq03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
paeq00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
R50912_14750
09124 Replication and repair
03420 Nucleotide excision repair
R50912_14750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
paeq03021
]
R50912_14750
03400 DNA repair and recombination proteins [BR:
paeq03400
]
R50912_14750
Enzymes [BR:
paeq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
R50912_14750
Transcription machinery [BR:
paeq03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
R50912_14750
DNA repair and recombination proteins [BR:
paeq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
R50912_14750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
AAA_22
DUF4055
Motif
Other DBs
NCBI-ProteinID:
AIQ41140
UniProt:
A0A089K056
LinkDB
All DBs
Position
3375994..3377706
Genome browser
AA seq
570 aa
AA seq
DB search
MNTDGTGACITRDDRTVLLECGHPGYEEARAVLAEFAELVKSPPVYHTYRITPLSLWNAA
AGGQEAEAVIAKLRRLSRWGIPSGLEGEIRQLMSRYGRLQLRTHVTDPLLMTLSADQAGL
LDELEDSLILKELGWYRAGPLHSYCPKSNRGLLKQELTGLGYPVLDYAGFRDGQELKLAW
IEEAGKGDGITGEAFGLRDYQRDAVRKFQGIGGIGGSGVVVLPCGAGKTVVGIAVLEHLQ
CETLILTSSTTSVEQWRGELLQRTTLSADEVGEYTGEKREVRPVTVATYQILTHRTAKGG
PFVHMNLFNERNWGLIIYDEVHLLPAPVFRATADIQATRRLGLTATLVREDGREGDVFSL
IGPKCYDLPWKVLERQGWIAAVDCTEVIVPMDERLRQQYIYAGAKEQFRLAAGNQAKAAA
AASIAAAHAGAAILVIGQYLDQLEQLAETLGAPLITGKTTQKERSALYAAFNEGRLPLLV
VSKVANFAVNLPDASVAIEVSGAFGSRQEEAQRLGRILRPKPGDNKAYFYTLVSGDSREQ
EFALRRRMFLTEQGYDYAVRMLESAEEAIL
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgaacactgatggaacgggtgcgtgcattaccagagacgaccggaccgttctgctggaa
tgcggccatcccggttatgaggaggccagggcggtcctggctgaatttgccgagcttgtc
aaaagccctccggtctatcatacctaccggataacaccgttgtccctgtggaatgcagcg
gctggtggccaggaggcagaggcggttattgctaagctccgcaggctgtcacgctgggga
attccctcaggacttgagggtgaaatcaggcagctgatgtcccggtacggaagattgcag
ctgcgcacgcatgtaacggatccgctgctcatgacgctctcggctgatcaggccggactg
ctggatgaactggaggacagcctgattctgaaagaactgggctggtatagggcagggccg
ttgcacagctattgtccgaagagcaacagggggctgctcaagcaggaattaacaggactt
ggatatccggtacttgattatgccggtttccgggatggacaggagctgaagcttgcctgg
atagaggaagcaggcaagggcgacggaattaccggggaagctttcgggctccgggattat
cagagggatgccgtcaggaagttccaggggattgggggcatcggcggcagcggtgttgtt
gttctgccttgcggagcgggcaaaacggtagtagggattgcagtcctggagcatctgcag
tgtgaaacgctgattcttacctccagtaccacctcggtggagcagtggcggggtgagctg
ctgcagcggacgaccctgagcgcggatgaagtaggggaatataccggtgagaagcgggag
gtacggcctgtcacggtcgccacctatcagattctgacccaccgtacagccaagggagga
ccgtttgtccacatgaatctgttcaatgagcggaactgggggctcatcatttatgacgag
gtccatctgctcccggctcctgtcttcagggctacggcagacattcaggctacgcgccgg
ctgggtcttacagcaacactggtccgggaggacggccgggaaggtgatgtgttctccctg
atcgggcccaaatgttacgatctgccctggaaggtgctggagagacaggggtggattgcg
gcagtggattgtacagaagtgattgtcccgatggatgagcggctgcggcagcaatatatc
tatgccggggcgaaagaacagttccgcctagcggccggcaatcaggctaaggctgcagcc
gcggcatcgattgctgcggcacatgccggggcggcgatcttggtgatcggccagtacctg
gaccagctggagcagctggcggagactctgggcgcgccgcttattaccggcaaaactaca
cagaaggaacggagcgcattgtatgccgccttcaacgaagggcggctgcccctgctggtc
gtctcgaaggtggctaattttgccgttaatctgccggatgcctcggtggcgattgaggta
tccggagccttcggctcgcggcaggaggaggctcagcggctggggcgtattttgcggcca
aagccgggcgacaacaaggcgtatttctatacgctggtctcgggggacagcagggagcag
gaattcgccttgcggcgcaggatgttcttaaccgagcaaggctacgattacgcagtcaga
atgctggaatccgcggaggaggctattctatga
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