Pseudomonas aeruginosa PA1R: PA1R_gp1910
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Entry
PA1R_gp1910 CDS
T02929
Name
(GenBank) Sigma-54 dependent transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
paer
Pseudomonas aeruginosa PA1R
Brite
KEGG Orthology (KO) [BR:
paer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
paer03000
]
PA1R_gp1910
Transcription factors [BR:
paer03000
]
Prokaryotic type
Helix-turn-helix
Other families
PA1R_gp1910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
GAF
PAS_4
HTH_23
HTH_32
HTH_20
AAA_5
PAS_9
IclR
HTH_22
PAS_8
HTH_7
HTH_30
HTH_AraC
HTH_50
HTH_28
PAS
PAS_7
Mg_chelatase
HTH_17
AAA_2
HTH_29
HTH_10
LZ_Tnp_IS481
HTH_IclR
HTH_Tnp_1
HTH_Tnp_1_2
Motif
Other DBs
NCBI-ProteinID:
AHA23662
LinkDB
All DBs
Position
complement(2146629..2148560)
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AA seq
643 aa
AA seq
DB search
MPASSMSRHARQVLTVAQGKIPPGGPATDPSIARSWLRCLEQHHLDPGQPMAPMVLEHAR
MLERRERLQQVLEIADGEMHSLYQQLSGNDHAVLLTDARGVILNCVNADAQRQTFEHAGL
WLGADWSEPCEGTNGIGTCVVERQALTIQQEEHFRSRHTGLTCSASPVFDPQGELMAVLD
VSSARQEVSRQSQFHTMALVNLSAKIIEGCYFLRRFEGSWLLRFHVQGDYVGLFSEGLLA
FEEDGRIRAVNQSALNLLGCPRQRLLGQPVETFFDCRLDDLLGRASPQPSASWPLRTREG
RTLYAMLRGAPRAIPQALAVPTAAKPAPAATGLCLGDAELAADFRRALKVYARDVPLLLN
GETGSGKEAFAKAVHLAGPRAEQAFVALNCAAIPETLIESELFGYRGGSFTGARKEGMRG
KLQQADGGTLFLDEIGDMPLALQTRLLRVLEERRVVPLGGEPEDVDVRLISATHRDLAGL
VADGRFREDLYYRLNGMVVSLPPLRERSDREELLDYLLAEEARGQRIQLDGEVRQGLLAY
RWPGNVRQMRTVLRTLVALCEDGRVGLRDLPADIRQALAALPPAAAAPAPAAGNSLDDAE
RAALLAALDGQRWHVSRVAEQLGISRNTLYRKLRRHGLVRGQA
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgcctgccagttccatgagccgccacgcgcggcaagtgctgaccgtcgcccagggcaag
atcccgccgggcggccctgcgaccgatccgtccatcgcccgctcctggctgcgctgcctg
gaacagcaccatctcgatcccggccagccgatggcgccgatggtgctggagcacgcgcgc
atgctcgaacgccgcgagcgcctgcaacaggtgctggagatcgccgatggcgagatgcac
agcctctaccagcagctttccggcaacgaccacgcggtactgctcaccgatgcccgcggg
gtgatcctcaattgcgtcaacgccgacgcccagcgccagaccttcgaacacgccggcctc
tggctcggtgccgactggagcgagccctgcgaaggcaccaacggcatcggcacctgcgtg
gtcgagcggcaggccctgaccatccagcaggaagagcacttccgtagccgccataccggc
ctgacctgctcggcgagcccggtgttcgatccgcagggcgagctgatggcggtgctcgac
gtgtcttcggcgcgccaggaagtctcgcggcagagccagttccacaccatggcgctggtc
aacctgtcggcgaagatcatcgagggctgctatttcctccgtcgcttcgagggctcttgg
ctactgcgcttccatgtccagggcgactatgtcggcctgttcagcgaagggctgctggcc
ttcgaggaagacgggcggatccgcgcggtgaaccagagcgcgctgaacctgctcggttgt
ccgcgccagcgcctgctcggccagccggtggagaccttcttcgattgccgtctcgacgac
ctgctcggtcgcgcctcgccgcaacccagcgccagctggccgctgcgcacccgcgaggga
cggaccctgtacgccatgctgcgcggcgcgccgcgggcgataccccaggccctggcggtg
cccacggcagcgaagccggcgcctgccgcgaccggcctgtgcctgggcgacgccgagctg
gccgccgatttccgccgggcgctgaaggtctacgcgcgcgacgtgccgttgctgctcaac
ggcgagaccggttccggcaaggaggccttcgccaaggccgtgcacctggccggcccgcgc
gcggaacaggcgttcgtcgcgctgaactgcgcggcgatcccggaaaccctgatcgagagc
gaactgttcggttatcgcggcggcagcttcaccggcgcgcgcaaggagggcatgcgcggc
aagttgcagcaggctgacggcggcaccctgttcctcgacgagatcggcgacatgccactg
gccttgcagacccgcctgctgcgggtgctggaagagcgccgggtggtaccgctgggcggc
gagccggaggatgtcgacgtgcgcctgatcagcgctacccaccgcgacctggccgggctg
gtcgccgatggacgcttccgcgaggatctctactaccgcctcaatggcatggtcgtgagc
ctgccgccgctgcgcgagcgcagcgaccgcgaggagctgctggactacctgctggccgag
gaggccaggggccagcgcatccagctcgacggcgaggttcgccagggcctgctggcctac
cgctggccgggcaacgtccggcagatgcgcacggtgctgcggaccctggtggcactctgc
gaggacggccgggtcggcctgcgcgacctgcccgcggatatccgccaggccctggcggcg
ctgccgcccgccgcagcggcgcccgccccggccgcgggcaacagcctggacgacgccgag
cgagccgcgttgctggcggcgctggacggccagcgctggcacgtgagccgggtggccgag
caactggggatcagccgcaacaccctgtatcgcaagctgcgccggcacggcctggtgcgc
ggccaggcctga
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