KEGG   Paracoccus aerodenitrificans: PAE61_03220
Entry
PAE61_03220       CDS       T09265                                 
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
  KO
K03089  RNA polymerase sigma-32 factor
Organism
paez  Paracoccus aerodenitrificans
Brite
KEGG Orthology (KO) [BR:paez00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:paez03021]
    PAE61_03220 (rpoH)
Transcription machinery [BR:paez03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     PAE61_03220 (rpoH)
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r1_2 HTH_19 HTH_11
Other DBs
NCBI-ProteinID: WBU64469
LinkDB
Position
complement(393397..394302)
AA seq 301 aa
MPNYTNLPAPSPEQGMNRYLQEIRKFPLLEPEEEYMLAKAWTDHEDSEAAHKLVTSHLRL
AAKIAMGYRGYGLPQAEVISEANVGLMQAVKRFDPEKGFRLATYAMWWIRASIQEYILRS
WSLVKMGTTSGQKKLFFNLRKAKNRIGAMEEGDLRPENVAQIANDLNVTEQEVIDMNRRM
AGSDASLNATVGSADGDSTAQWQDWLEDEDANQAEAYAEADELNQRREMLVQAMDVLNDR
EKDILMERRLRDDPLTLEELSGRYDVSRERIRQIEVRAFEKLQERMRSLARDKGMSIETS
D
NT seq 906 nt   +upstreamnt  +downstreamnt
atgcccaattataccaacctccccgcaccaagccccgaacaggggatgaaccggtatctg
caggaaatccgtaaatttccgctgcttgaaccggaagaagaatatatgcttgcgaaggcc
tggacggatcacgaagattcagaggccgcgcataagcttgtcacctctcacctgcgcctc
gccgcgaagatcgcgatgggctatcgcggctatgggctgccgcaggccgaggtgatttcc
gaagccaatgtcgggctgatgcaggcggtgaagcgcttcgatccggaaaaagggttccgg
ctggcgacctatgcgatgtggtggatccgcgcctcgattcaggaatatatcctgcgctcg
tggtcgctggtgaagatgggcaccacatcggggcagaagaaactgttcttcaacctgcgc
aaggccaagaaccgcatcggcgcgatggaagagggcgatctgcgcccggaaaacgtcgcc
cagatcgccaatgacctgaatgtcaccgagcaggaagtgatcgacatgaatcgccgcatg
gcgggttcggacgcttcgctaaatgcgacggtgggttcggcggatggcgattcgacggcg
caatggcaggactggctggaagatgaggatgccaatcaggccgaagcctatgccgaggcc
gatgagttgaatcaaaggcgcgaaatgctggtgcaggcgatggatgttctgaatgaccgt
gaaaaggacattctgatggaacgccgcctgcgcgacgacccgctgacgcttgaggagctc
tcgggccgatatgacgtctcgcgcgaacggatccgccagatcgaggtgcgggccttcgaa
aaactgcaagagcgcatgcgcagtctcgcccgcgataaaggcatgagcatcgagaccagc
gattga

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