Paracoccus aerodenitrificans: PAE61_17235
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Entry
PAE61_17235 CDS
T09265
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
paez
Paracoccus aerodenitrificans
Pathway
paez03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
paez00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PAE61_17235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paez03400
]
PAE61_17235
Enzymes [BR:
paez01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
PAE61_17235
DNA repair and recombination proteins [BR:
paez03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
PAE61_17235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
WBU64047
LinkDB
All DBs
Position
3255920..3256705
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AA seq
261 aa
AA seq
DB search
MFTIATWNINSVRLRAGLVERLLREESPDILCLQECKSPVEKIPVEGFHALGYRHMVARG
QKGYNGVAILSRLPIEDAGDRDYAAMGHARHVSARLENGVVLHNFYIPAGGDIPDREVNP
KFGQKLDFLTEMRDVFHENAPQRSIIVGDFNIAPREDDVWSHKQLLKVVSHTPIEVEHLA
AVQDAGKWVDITRKDIPEGKLYSWWSYRNRDWVASDRGRRLDHIWASPDIANAGHGSRVL
RPVRGWEGPSDHVPVFASFDL
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgttcaccatcgccacctggaatattaattcggttcggttgcgtgcggggcttgtcgag
cgtctgctgcgcgaggagtctcccgacatattgtgcctacaggaatgcaagtctccggtc
gagaaaattccggtcgaggggttccatgcgctcggctatcgccacatggtcgcacgcggg
caaaaagggtataacggcgttgccatcctgtcgcgcctgcccatcgaggatgccggagac
cgggactatgccgcgatgggtcatgcccggcatgtttccgcacggctggaaaacggtgtg
gttctgcacaatttctatatccccgccggcggcgatatcccggaccgtgaggtcaatccg
aaattcgggcagaagctggatttcctgaccgagatgcgggacgtgtttcacgagaacgcg
ccgcagcgttccatcatcgtcggcgatttcaatatcgccccgcgcgaggacgatgtctgg
tcacataaacagcttctgaaagtggtcagccacactccgatcgaggtcgagcatctggcg
gccgttcaggatgcggggaagtgggtcgatatcacccgcaaggatatccccgagggtaag
ctgtacagctggtggtcctatcgcaaccgggactgggttgcctcggaccgggggcggcgg
ctggatcatatctgggccagccccgatatcgccaatgccggtcatggcagccgcgtcctg
cgtccggtgcgcggctgggaaggtccatcggatcatgtgccggtttttgccagcttcgat
ctgtga
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