Pseudoalteromonas agarivorans: PAGA_a1250
Help
Entry
PAGA_a1250 CDS
T06137
Symbol
hupB
Name
(GenBank) DNA-binding protein HU-beta
KO
K03530
DNA-binding protein HU-beta
Organism
paga
Pseudoalteromonas agarivorans
Brite
KEGG Orthology (KO) [BR:
paga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
paga03032
]
PAGA_a1250 (hupB)
03036 Chromosome and associated proteins [BR:
paga03036
]
PAGA_a1250 (hupB)
03400 DNA repair and recombination proteins [BR:
paga03400
]
PAGA_a1250 (hupB)
DNA replication proteins [BR:
paga03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
PAGA_a1250 (hupB)
Chromosome and associated proteins [BR:
paga03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
PAGA_a1250 (hupB)
DNA repair and recombination proteins [BR:
paga03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
PAGA_a1250 (hupB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-CCDC81_euk_2
HU-DNA_bdg
Arteri_nsp7a
Motif
Other DBs
NCBI-ProteinID:
ATC81682
UniProt:
A0A290RLS4
LinkDB
All DBs
Position
I:1169201..1169473
Genome browser
AA seq
90 aa
AA seq
DB search
MNKSQLIDQIAADADISKAAAGRALDSFIESVSGALKDGDSVALVGFGTFSVRERAARSG
RNPQTGETIQIAAANIPSFKAGKALKDAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaatctcaattaatcgatcaaatcgcagctgacgctgacatttctaaagcggct
gcaggtcgtgcactagattcattcatcgagtctgtatctggagcgcttaaagatggcgat
tcagttgcacttgtaggttttggtactttctcagtacgcgagcgtgctgctcgttcaggc
cgtaacccacaaactggtgaaactatccaaatcgctgcggcaaatattccttctttcaaa
gccggtaaagcgctgaaagacgcagtaaactaa
DBGET
integrated database retrieval system