Pantoea agglomerans C410P1: BEE12_00060
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Entry
BEE12_00060 CDS
T04739
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K02034
peptide/nickel transport system permease protein
Organism
pagc
Pantoea agglomerans C410P1
Pathway
pagc02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pagc00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BEE12_00060
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pagc02000
]
BEE12_00060
Transporters [BR:
pagc02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
BEE12_00060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
OppC_N
DUF6338
Motif
Other DBs
NCBI-ProteinID:
AOE38416
LinkDB
All DBs
Position
complement(14545..15396)
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AA seq
283 aa
AA seq
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MNILSLPWRFLQSLSWSGRLGLIMSLFWLLMAVFGTPLAPHSIDDIGGGPLMGGLTSDNL
LGTDYLGRDMLSRILYGAKFSIGLALSAALLASLIGTLLALLAAVAGRWLEELLGRVNDA
LLVLPGKVLSLMIVAVFGSSLPMLILTAVFTYWPGAFRIAFAMASSLRSMDYVRASRLRG
ESRWYIAIHDILPNMVHPMLTDFGLRFVYIVLLLSGLSFLGLGVQPPYADWGTLVRENMQ
GLFDGSPAVLMPALAIASLTIGANLFIDSLQAMRPMTLAKEGA
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgaatattctctcgttgccctggcgtttcttacagtcgctctcctggtcaggacggctg
ggtctgataatgtcgctgttctggctgctgatggcggtattcggcaccccgctggccccg
cacagcattgatgacatcggcggcggcccgctgatgggcggcctgacgtctgataacctg
ctgggcaccgactaccttgggcgcgacatgctgagccgcattctctacggcgcgaagttc
tctatcggtctggcgctgagtgcggcgctgctggccagcctgatcggcacgctgctggcg
ctgctggcagcggtggcggggcgctggctggaggagttactgggccgcgtcaacgacgcg
ctgctggtactgccgggtaaagtgctgtccctgatgatagtcgcggtatttggctcctca
ctgccaatgctgatcctcacggcggtcttcacctactggccgggcgcattccgtatcgcg
tttgccatggccagctcgctgcgcagcatggactacgtccgggcgtcacggctgcggggc
gaaagccgctggtatatcgccattcacgatatcctgcccaacatggtgcacccgatgctg
actgactttggtctgcgctttgtctacatcgttctgctgctgagcggcctgagcttcctc
ggtctgggtgttcagccgccctacgccgactggggcacgctggtgcgtgaaaatatgcag
gggctgtttgacggctcgcctgcggtgctgatgcccgcgctggcgattgccagcctgacc
attggtgccaacctgtttattgacagcctgcaggcgatgcgtccgatgacgctggcgaag
gagggagcatga
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