Planktothrix agardhii: NIES204_40740
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Entry
NIES204_40740 CDS
T05658
Gene name
lpdA
Definition
(GenBank) dihydrolipoamide dehydrogenase
KO
K00382
dihydrolipoamide dehydrogenase [EC:
1.8.1.4
]
Organism
pagh
Planktothrix agardhii
Pathway
pagh00010
Glycolysis / Gluconeogenesis
pagh00020
Citrate cycle (TCA cycle)
pagh00260
Glycine, serine and threonine metabolism
pagh00280
Valine, leucine and isoleucine degradation
pagh00310
Lysine degradation
pagh00380
Tryptophan metabolism
pagh00620
Pyruvate metabolism
pagh00630
Glyoxylate and dicarboxylate metabolism
pagh00640
Propanoate metabolism
pagh01100
Metabolic pathways
pagh01110
Biosynthesis of secondary metabolites
pagh01120
Microbial metabolism in diverse environments
pagh01200
Carbon metabolism
Module
pagh_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
pagh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
NIES204_40740 (lpdA)
00020 Citrate cycle (TCA cycle)
NIES204_40740 (lpdA)
00620 Pyruvate metabolism
NIES204_40740 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
NIES204_40740 (lpdA)
00640 Propanoate metabolism
NIES204_40740 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
NIES204_40740 (lpdA)
00280 Valine, leucine and isoleucine degradation
NIES204_40740 (lpdA)
00310 Lysine degradation
NIES204_40740 (lpdA)
00380 Tryptophan metabolism
NIES204_40740 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pagh04147
]
NIES204_40740 (lpdA)
Enzymes [BR:
pagh01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
NIES204_40740 (lpdA)
Exosome [BR:
pagh04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
NIES204_40740 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
FAD_oxidored
FAD_binding_2
GIDA
K_oxygenase
3HCDH_N
UDPG_MGDP_dh_N
AlaDh_PNT_C
2-Hacid_dh_C
Motif
Other DBs
NCBI-ProteinID:
BBD56740
UniProt:
A0A2Z6CK98
LinkDB
All DBs
Position
complement(4500989..4502419)
Genome map
AA seq
476 aa
AA seq
DB search
MDYDLVIIGAGVGGHGAAIHAVGCGLKTAIIEAADMGGTCVNRGCIPSKALLAASGRVRE
LHNTHHLKNLGIQLGQVSFDREQIANHADNIVTKLRGDLTNSLKRLGVDVIQGWGKIAGA
NKVTVETTNGEKTITAKDIILAPGSVPFVPPGITIDHQTVFTSDDAVKLASLPQWIAIIG
SGYIGLEFSDIYTALGCEVTMIEALDQLMPTFDPDIAKLAQRVLINPRDIETKVGKLALK
VTPGSPVIIELADTKTKEVEEVLEVDACLVATGRIPVSKNLGLESVNVEPIRGGFIPTND
HLEVLSGGEPVPHLWAIGDATGKMMLAHTASAQGVAVVETICGRPRAVDYRSIPAAAFTH
PEISYVGLTEPAAKELGQTEGFEIATVKTYFKGNSKAIAEGETEGMAKVIYRKDTGEILG
VHIFGLHASDLIQEAANAMYHRQSVHDLVFSVHTHPTLSEVLDEAYKRAVFSVGGH
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atggattacgatttagtgattattggtgcgggagtgggcggacatggtgctgctatccac
gccgtcggttgtggcttgaaaaccgcaattattgaggcggcggacatggggggaacttgt
gttaaccgaggctgtattccctctaaagcgttattagcggcgtcgggacgggtcagagaa
ttacataatacccatcacttaaaaaatttagggattcagttaggacaagtcagttttgat
cgtgaacaaattgctaaccatgctgataatattgtcactaaacttcggggtgacttgact
aatagtttgaagcggttaggggttgatgtaattcaaggttggggtaaaattgccggggcg
aataaagttaccgttgaaactactaacggagaaaaaacaattaccgctaaagatattatt
ttagcaccgggttctgtgccttttgttcccccaggaattacgattgatcatcaaacagtt
tttaccagtgatgatgcggttaaattagcatccctaccccaatggattgcgattattgga
agtggctatatcggattagaattttctgatatttatacggctttaggttgtgaagttacc
atgattgaagccttagatcaattaatgccaacttttgatcctgatattgctaaattagct
caacgggttttaattaatcccagggatattgaaactaaagtcggaaaattagccttaaaa
gtaacgcctggttctccggttattattgagttagccgataccaaaactaaagaagtagaa
gaagtactagaagtggatgcttgtttggttgctaccgggcggattccggtgagtaaaaat
ttaggtttagaatcggtgaatgttgaacctattcggggcggttttattcctacaaatgat
catttagaggtattgtctggaggcgaacctgttccccatttatgggcgattggagatgcg
acgggtaaaatgatgttagcccataccgcatccgcccagggagtagccgttgtagagact
atttgcggacgtcctcgcgccgtagattatcgtagtattccggcggctgcttttacccat
cctgaaattagttatgtgggtttaactgaacctgctgcaaaggaattaggacaaacagaa
gggtttgaaattgcaacggtaaaaacctattttaagggtaattctaaagcaattgcggag
ggagaaaccgaaggtatggctaaagtgatttatcggaaagatacgggggaaattttagga
gttcatatctttggtcttcatgcttctgatttaattcaagaagcggcaaatgctatgtat
caccgtcaatctgtccatgatttagtcttctcagttcatacccatcctaccctttcagaa
gtgcttgatgaagcctacaaacgggctgtttttagtgtggggggtcattag
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