Paenibacillus sp. IHB B 3084: ASL14_21315
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Entry
ASL14_21315 CDS
T05348
Name
(GenBank) helicase-exonuclease AddAB subunit AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
paih
Paenibacillus sp. IHB B 3084
Brite
KEGG Orthology (KO) [BR:
paih00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paih03400
]
ASL14_21315
Enzymes [BR:
paih01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ASL14_21315
DNA repair and recombination proteins [BR:
paih03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
ASL14_21315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD_C
AAA_29
nSTAND1
ABC_tran
AAA_16
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ALP38336
UniProt:
A0A0S2S9I0
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All DBs
Position
4650256..4653822
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AA seq
1188 aa
AA seq
DB search
MSVRLLIGRSGSGKSTLIRREMTAMLREEPLGKPMLLLVPEQSSFASEHALLTEAGNGIQ
GTVRAQVMGFHRLAYLVMQETGGSALVPVTAEGKKMLLYKIIRRRKDELSLFKDSGDQLG
FVDRLNTLFTELKQYGNDTQSVPEQLERMNAAGESTPILRGKLKDISLIYEDFERELALK
YIDGEDTLRMLAEQIAESSIVRGADIWMDGYRRFTPHEYKVVEQLMLHASSLTVALTCNR
SYESGQLPHELDLFHPAAATYVKLKGMADELMIDTQTQLLRPDPLPRFKGRPALAYLEAD
FERRAGHRNQERPIRQQQMREQWKDKQPEEIKLYAAANRRVELEGAVREMRRLARDEGAR
YREMALFVRQIEDYEPWVEPIFKQYEVPVFLDQRRNVLHHPLVEMIRASLDIVQRRWRYE
DVFRAVKTDLLLPQDGRVSREDMDRLENYALACGIQGSRWTDGRPWQAVPSLSLELEEQE
RNRQRDETLDLMELCRDVIVTPLRAFEKRLGKARTALEKCEAVYLLLEDAEIGHKLDELI
HQAEEVGNPEQAKEHRQVWDAVLELLDQIVEMMGDEKLDTSLFAGVLETGLIEYRMGLVP
PALDQVLVGNTDRTRIAGIQHTFVLGMNEGVMPAVFHEDGVLNEQERTALNERGVELAPD
MTRRLLDERFLAYTALTSAGSSLWMSYAVTDEEGKSLLPSELVRHVRQLFPALEEHPLAA
YPLPRDPWATQWEYASHPSEALPQLIAQCRQWRHGGEILSPWWEVYNWYAGQQGREKDKL
RQLLTSLFYENHAEMRKETSRRLYGSKLRTSVSRMERFVACPFSHFASHGLRLKERQMYR
LKAPDIGQLFHAALGEMAMNLRKRNVSWGSLSTEECRQEAESTVERLAPRLQGEILMSSK
RYGYILRKLKDIVSRASLILGEHARRGSFEPLELELGFGPGEKLPPLTFRLDNGVVMEIV
GRIDRVDVAEGEQGLLLRVIDYKSSQKDLKLHEVYYGLSLQMLTYLDVLLNAAEEWLGET
AYPAGTLYFHVHNPMLQSPNGLSAEQARQELLKRFKMKGLLLADRDVVGQMDTALDKGYS
SILPVAVKADGSFYSSASVASPEQWDSLLASVRDNIRTIGTRMTEGDVAIEPYRIQQETA
CTFCSFKPVCQFDDSLEGSGYNQWGKPDKDQIWNLLGHTQEGKGGMNP
NT seq
3567 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtccgtttgttaattggccgctcaggcagcggcaaaagcacgttaatccgtcgt
gaaatgacggctatgctacgcgaggaaccgctaggtaagcctatgctgttacttgtgccg
gagcaatcgtcatttgcttccgagcatgcgctgcttacagaagccggaaacggtattcag
gggacggtgcgcgcccaggtcatgggattccatcgtcttgcctatttggtcatgcaggaa
accgggggttcggcgttggtacctgtgacggcggaaggcaagaagatgcttttatataaa
attattcgtcgtcgcaaggatgaactgagtttatttaaggattcgggagaccagttgggc
tttgtggatcggttaaatacgctgtttacggagctaaagcagtacggaaatgatactcag
tcagtaccggagcaactggagcgaatgaatgcggcgggggaatcgactccgattttgcgc
ggtaagctcaaggatatcagtttgatctatgaggattttgaaagagagctggcgcttaaa
tatattgacggcgaggatacgctgcgtatgctggcagagcagattgccgaatcttccatt
gtacgtggagcggatatttggatggatggctaccgcaggtttacgccgcacgaatacaag
gtggttgagcagcttatgctgcacgcttcttcgttgacggtcgcgctgacctgcaaccgc
agctacgagagtggacagcttccgcatgaactggatttatttcatcctgcggcggctacc
tatgtaaagcttaaagggatggcagacgagctgatgatcgatacgcagacacaattgctg
cgacctgatccgcttccgagatttaagggccgtccggcgttggcgtatctggaggcagat
tttgaacgtcgcgcagggcatcggaatcaggaacgacccattcgtcagcagcagatgcgg
gagcaatggaaggacaagcagccagaagaaatcaaactgtatgcggcagcgaaccgacgt
gtggagctggagggtgcagtgcgcgaaatgcgccgcctggcccgagatgagggagcacgt
tatcgggaaatggcgctgttcgtacgccagattgaggattatgagccgtgggtggagccg
atattcaaacaatatgaggttccggtatttctggatcagcgcagaaacgtattgcatcat
ccattggtggaaatgattcgagcttcgctggatatcgttcagcggcgttggcggtacgag
gatgtatttcgagcggtcaaaacggatctgctgttgccacaggatggacgggtcagccgt
gaggatatggatcgtctggaaaattacgcattggcctgtgggatacagggcagccgctgg
acagacggacggccttggcaggcggtacccagcctttcgctggagctggaggaacaggag
cgaaatcgtcaacgggacgaaacactggatctaatggagctgtgccgcgatgtgatcgtg
acgcctttacgtgcgtttgagaaacgtctgggtaaggctcgtactgcacttgagaagtgt
gaagcggtgtacttgttgctggaggatgcggaaattgggcataagctggatgaattgatc
catcaggctgaggaagtgggaaatcccgagcaggcgaaggagcatcgtcaggtatgggat
gcggtgcttgagctgttggatcagatcgtcgaaatgatgggtgacgagaagctggacact
tctttgtttgcaggtgtgctggaaacggggctgatagaataccgcatgggtcttgttcct
ccagctctggatcaggtgctggtcggaaacacagaccgtacacgtatagcgggaattcag
catacctttgtgctgggtatgaatgaaggtgtaatgccggctgtatttcatgaagacggt
gtgctgaatgagcaggaacggaccgccttgaatgaacggggcgtggaactggcgccggat
atgacaagacgtctgctggatgaacgttttcttgcgtatacggcgctcacgtcagccgga
agcagtctgtggatgagctacgctgtgaccgacgaagagggcaagtcgttgttgccgtca
gagttagtacggcatgtccgtcaactgttccctgctctggaagagcacccgttggctgca
tatcctttgcctcgggacccatgggcaacgcaatgggagtatgcttcccatccgtccgag
gcattgccgcagctgatcgcgcaatgccggcaatggcggcatggtggagagattttatct
ccctggtgggaggtatacaactggtatgcgggccagcaggggcgtgaaaaggacaagctg
cgtcagttgctgacctcacttttttacgaaaatcatgccgaaatgcggaaggaaacgagt
cgtcgtctgtacggcagcaagctgcgtaccagcgtatcccgtatggaacgttttgtcgct
tgtccgttttcgcattttgcttcccatggtcttcgcttgaaggagcgccaaatgtatcgg
ctaaaggcaccggatatcgggcagctgttccatgcggcgctcggagagatggcgatgaat
ttacgtaaacgaaatgtgagctggggcagtctcagcacagaggaatgccgacaagaggcg
gaatcgacggtggagcgtttggctccccgcctgcaaggcgagattttaatgagctccaag
cggtacgggtacattttgcgcaagctgaaagacattgtgagtcgggcttcgctgattttg
ggtgagcatgcgcgtaggggcagctttgagccactggagctggagctgggttttgggccg
ggagaaaagcttcctcctttgacctttcgactggacaacggtgtggtgatggaaatcgtc
ggacgaattgaccgcgtggatgtggcagagggagaacaaggcttgcttttacgcgtcatt
gattacaaatccagccaaaaggacctcaagctgcatgaagtgtactatggcttgtccttg
caaatgctcacgtacctggacgtgctgctgaatgcggcggaggaatggcttggcgagacg
gcttatccggcaggtacgctgtattttcacgtccacaatccgatgttgcagtcgccgaat
ggtcttagcgcggaacaggcccgtcaggagcttctaaaacgcttcaagatgaaagggcta
ttgctggcggatcgtgatgtggttggacaaatggacacggcactggacaaggggtattcc
tccattttgccagttgcggtaaaggcggacggcagcttttacagcagtgcgtctgtcgct
tcgccggaacagtgggatagcctgctggcttcggtacgcgataatatccgaacgattggg
acacgcatgacagagggcgacgtggcgattgaaccttatcgtatccagcaagagacggca
tgcaccttctgttctttcaaacctgtctgtcaatttgacgacagtctggagggcagcggc
tacaaccaatgggggaaacccgacaaggatcagatctggaatctgctcggtcatacacag
gaagggaaaggaggaatgaacccatga
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