Pantoea ananatis AJ13355: PAJ_2404
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Entry
PAJ_2404 CDS
T01969
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
paj
Pantoea ananatis AJ13355
Pathway
paj03410
Base excision repair
paj03430
Mismatch repair
paj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
paj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PAJ_2404 (recJ)
03430 Mismatch repair
PAJ_2404 (recJ)
03440 Homologous recombination
PAJ_2404 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paj03400
]
PAJ_2404 (recJ)
DNA repair and recombination proteins [BR:
paj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
PAJ_2404 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
PAJ_2404 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
PAJ_2404 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHHA1
DHH
RecJ_OB
Motif
Other DBs
NCBI-ProteinID:
BAK12484
UniProt:
A0A0H3L6M5
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All DBs
Position
complement(2903895..2905406)
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AA seq
503 aa
AA seq
DB search
MVVGDFDADGATSTALTVLALRSMGCSNVQYLVPNRFEDGYGLSPEVVEQARARGAEMIL
TVDNGISSHAGVALAHQHGIAVLVTDHHLPGETLPDADAIVNPNLPDCHFPSRSLAGVGV
AFYLMMALRAHLRTQGWFGVTRSEPNLADLLDLVALGTVADVVPLDANNRILVWQGLSRI
RAGKCRPGIKALLEIANRDARQLAASDLGFALGPRLNAAGRLDDMSVGVALLLTDDLSQS
RMLASELDALNQMRKEIEQGMQSEALALCQKLENEQTDLPLGLAFYHPEWHQGVVGILAS
RLKERFHRPVIAFAPAGDGMLKGSGRSIAGLHLRDALERLDTLHPGLMQKFGGHAMAAGL
SLEEARYDEFRQRFADLVGEWLAGEALQGVIWSDGALQPAEFSLQTAEVLRDAGPWGQSF
PEPAFDGRFRLLQQRLVGERHLKVMVEPLEGGPLIDGIAFNVDTTLWPDSSVRQVELAYR
LDINEYRGNRSVQLIIEHLWPLS
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atggtcgtcggggatttcgacgctgacggtgccaccagtaccgccctgacggtgctggcg
ctgcgcagcatgggatgcagcaacgtgcagtacctggtgcccaatcgtttcgaagatggc
tacggcctgagtccggaagtggttgagcaggcccgcgcgcgcggtgcagagatgattctg
accgtcgataacggcatttcgtcccatgcgggtgtggcgcttgcgcatcagcacggcatt
gcggtgttggtgaccgaccaccacttaccgggcgaaacgctgcctgacgccgatgctatc
gttaatcccaacctgcctgactgtcatttcccctctcgttcgctggcgggcgtgggcgtc
gctttctatctgatgatggccctgcgcgcccatttgcgcactcagggctggtttggcgtc
acgcggtcggaacccaatctggccgacctgctcgatctggtggcgttgggcacggtggca
gatgtggtgccgctggatgccaacaaccgcattttagtgtggcagggcctgagtcgtatt
cgggccggaaagtgccgtccgggcatcaaggccctgctggaaatcgccaaccgcgatgcc
cgacagttggccgccagcgacctgggttttgccctggggccccggcttaacgctgccggt
cggctggacgatatgtctgtcggcgtggcgctgttactgaccgacgatctcagccagtcg
cgcatgttagccagcgaactggatgcgcttaaccagatgcgcaaagagattgagcagggg
atgcagagcgaggcactggcgttatgccaaaagctggagaacgagcaaaccgatttgccg
ctggggctggccttttatcatcctgagtggcatcagggcgtggtcgggattctggcttcc
cgcctgaaagagcgttttcatcgcccggttattgccttcgcaccggccggtgatggcatg
ctgaagggatcgggacgatcgattgccggtctgcatctgcgcgatgcgctggagcgtctt
gatacgttgcatcctggcctgatgcagaagtttggtggtcacgcgatggccgccggactg
tcgctcgaagaggcccgctacgacgagtttcgtcagcgttttgcggacctggtgggcgaa
tggctggccggcgaagcgttgcagggcgtcatctggtcggacggtgccctgcagcccgct
gaattttctcttcagacggcggaagtactgcgtgatgccggcccatggggccagtctttc
cctgagcccgctttcgacggccggttcaggctactgcagcagcgcctcgttggtgaacgt
cacctgaaggtcatggttgaacctctggagggcggaccgctgatcgacggtatcgcgttc
aacgtggataccacgttgtggcctgacagcagcgtgcgccaggtcgaactggcctatcgg
cttgatatcaatgagtatcgcggcaatcgctccgtccagctgatcattgaacatctctgg
ccgctcagttag
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