Cutibacterium acnes SK137: HMPREF0675_5311
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Entry
HMPREF0675_5311 CDS
T01215
Name
(GenBank) apurinic endonuclease (APN1)
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
pak
Cutibacterium acnes SK137
Pathway
pak03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HMPREF0675_5311
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pak03400
]
HMPREF0675_5311
Enzymes [BR:
pak01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
HMPREF0675_5311
DNA repair and recombination proteins [BR:
pak03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
HMPREF0675_5311
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
ADD99593
LinkDB
All DBs
Position
complement(2354559..2355356)
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AA seq
265 aa
AA seq
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MTKWIIGGHVDTADAVAQAAARGADIAQISLGDPKSWKKPVCDFPGGSLALREAAGEAGL
TLVVHSAFVINVASLNNRIRIPSRKLLQQTLDAAAEVGAMGVVVHGGHVRAGEPIEKGQD
NWRKAIDGLEMSVPLFVENTAGGDNAMARFLERLSGTWEAIGAASGHENVGFCLDTCHAF
AAGLDMASLVDDVRGITGRINLVHANDSQGAVGSGRDRHANLGEGQCEADTLVDVIRAAE
APVVVETPGEAEGQARDIAWLRERL
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atgacgaagtggatcattggcggtcatgttgacaccgctgacgccgtagcgcaggcggca
gcacgtggagccgacatcgctcagatcagcctgggcgatccgaagtcttggaagaagccg
gtgtgtgactttcccggcggctcgctggcgctgcgggaggccgctggggaggctgggctg
acgctggttgtgcactctgctttcgttatcaacgtcgcttccctcaataaccgtatccgc
attcctagtcgcaaactgttgcaacagacccttgatgccgctgctgaagttggggcgatg
ggggttgtcgtccatggtggccacgtgcgtgccggggagccgattgagaaaggtcaggac
aactggcgcaaggctattgacggccttgaaatgtcggtgccgctatttgtcgaaaacacc
gccggtggggacaatgcgatggcgcggttcctggagaggttgtcgggtacgtgggaggcc
atcggtgccgcgtcagggcacgagaacgtcgggttctgtctggatacctgccacgctttc
gcggccggtctcgacatggcgagtctggtcgacgatgtgcgtggcattacgggtcggatc
aacctggtgcacgctaatgattctcagggcgctgtcgggtcggggcgggatcgccacgcc
aacctgggggaaggtcagtgcgaggccgataccctcgtcgatgtcatccgtgctgcggag
gccccggtcgtcgtcgagaccccaggggaggctgagggtcaggcccgcgacatcgcctgg
ctgcgtgagcgcttgtga
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