Providencia alcalifaciens: CO695_18285
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Entry
CO695_18285 CDS
T05107
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
pala
Providencia alcalifaciens
Pathway
pala03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pala00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CO695_18285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pala03400
]
CO695_18285
DNA repair and recombination proteins [BR:
pala03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CO695_18285
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CO695_18285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
UB2H
AAA_22
Kinesin
Motif
Other DBs
NCBI-ProteinID:
ATG18158
UniProt:
A0A9N7E4P8
LinkDB
All DBs
Position
complement(3888600..3890618)
Genome browser
AA seq
672 aa
AA seq
DB search
MSKDFKLYSDFQPAGDQPEAIRKLREGLEDGLAHQTLLGVTGSGKTFTIANVIAQENRPT
MLMAHNKTLAAQLYSEMKAFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIE
QMRLSATKALLERRDVIVVASVSAIYGLGDPDSYLKMMLHLTDGMIIDQRSILRRLADLQ
YTRNDQAFTRGTFRVRGEVIDIFPAESDEYALRVELFDEEVERLSLFDPLTGAIQHRVPR
FTVYPKTHYVTPRERILEAMENIKVELADRRRVLLENNKLLEEQRITQRTQFDLEMMSEL
GYCSGIENYSRYLSGRAPGEPPPTLFDYLPADGLLVVDESHVTIPQIGAMYKGDRSRKET
LVEYGFRLPSALDNRPMRFEEFEALAPQTIYVSATPGNYELDKSGQEVIEQVVRPTGLLD
PLIEVRPVATQVDDLLSEIRIRVQKQERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDI
DTVERVEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG
RAARNLNGKAILYGDRITNSMGKAIAETERRRAKQMAFNEAHGIIPQGLNKKVGDILQIG
HKVGGKGKGRSKESIKDESALNVQSMSTKELEQRISQLESQMYKHAQDLEFEAAARVRDE
LQILRNQFIANS
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaggattttaaactgtattctgatttccagcctgcgggtgatcagcccgaggcg
attcgtaaattaagagaagggttagaagatggacttgctcatcaaaccttactaggggtt
acggggtcaggtaaaacgtttacgattgctaatgttatcgctcaagaaaatcgcccaacc
atgttgatggcgcataataaaacattggcagcgcagctatatagcgaaatgaaagccttc
ttccctgaaaatgcagtggaatatttcgtttcttattacgattattatcaaccagaagcc
tatgtccccagctcagatacctttattgaaaaagatgcttcagtaaacgaacatattgaa
caaatgcgtttgtctgcaacaaaagccttgcttgaacgtcgtgatgtcattgttgtggca
tcggtgtcggcaatttatggattgggtgaccccgatagctacttgaaaatgatgctgcat
ctgactgatggcatgattatcgaccaacgttctattttgcgccgccttgctgacctgcaa
tatacccgcaatgaccaagcgtttacgcgaggaacattccgagttcgcggtgaagtgatt
gatattttccctgctgaatccgatgaatatgcactgcgagtcgagctctttgatgaagaa
gtcgagcgtttatcgctatttgacccattaacaggggcgattcaacatcgtgttcctcgt
tttaccgtataccctaaaacgcactatgtaacgccaagagagcgtattctggaagcgatg
gagaatatcaaggttgagctagcggacaggcgcagagtgctgttagaaaataataaatta
ttagaagaacagcgaattactcagcgaactcagtttgatttagaaatgatgagtgagctg
gggtattgctcgggaattgaaaactactcacgttatttatcgggtcgagcaccaggtgaa
ccacctccgacattatttgactatttacccgcggatggtttattggtggtggatgagtcc
catgtgactattccgcaaataggcgctatgtacaaaggggaccggtcgcgtaaagaaaca
ttagtagaatacggtttccgacttccctccgcgttagataaccgtcctatgcgctttgaa
gaatttgaagctttggcgccgcaaactatctatgtctctgcaacgcctggtaactatgag
ttggataaatcagggcaggaagtcattgagcaggtagtgagaccaacaggactccttgac
cctcttattgaagtgcgcccagtagcgactcaagtggatgatttactctctgaaattcgt
attcgtgtccaaaaacaggaacgcgtattggtgaccacattaaccaaacgaatggcggaa
gatcttactgaatatttagaagagcatggggagcgtgtacgttacttgcactcggatatt
gataccgtcgagcgtgtcgaaattattcgtgatttgcgtcttggcgaatttgatgtgcta
gtgggaatcaacttactgcgagaaggtttggatatgcctgaagtttcgctggttgcgatt
cttgatgcagacaaagaaggcttcttacgttcagagcgttcattgattcaaaccattggt
cgtgcggcacgtaacttgaatggtaaagcgattctgtatggagacagaatcactaactcg
atggggaaagccattgccgaaactgaacgacgtcgcgcgaaacagatggcgtttaacgaa
gctcacggcattattcctcaaggcttaaataagaaagtaggggatatcctacaaattggt
cataaagtgggtggtaaaggcaagggacgcagtaaagaaagtattaaagatgaatctgca
ctgaatgtgcaatccatgtcaaccaaagagttggaacagcgtatttctcaattagaatcg
caaatgtataagcatgcgcaagatttggaattcgaggcagctgcacgggtgcgtgatgaa
ttacaaattctacgtaaccaatttatcgccaattcgtaa
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