Pseudomonas alcaligenes: A0T30_06255
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Entry
A0T30_06255 CDS
T04318
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
palc
Pseudomonas alcaligenes
Brite
KEGG Orthology (KO) [BR:
palc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
palc03400
]
A0T30_06255
Enzymes [BR:
palc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
A0T30_06255
DNA repair and recombination proteins [BR:
palc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
A0T30_06255
Prokaryotic type
A0T30_06255
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AMR65987
LinkDB
All DBs
Position
complement(1367357..1368796)
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AA seq
479 aa
AA seq
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MRQLIWLRSDLRLHDNTALSAAMAAGPTLAVYLISPEQWREHDDAACKVDFWLRNLAALH
TQLAALNVPLLVRQAPHWRDAPQVLGALCREQAIDCVWVNEEYGINEQARDRAVQQHLRQ
QGVNLRSCLDQLFFAPGSVLTQAGNYFQVYSQFRKACYRNLHTAIPPLVPTPQPQAPLPV
ASDALPLAVDGFATPAPALRELWPAGEDAALRRLADFAEERMAGYQERRDFPAVDGTSQL
SPYLAAGVISPRQCLHAALRINQGEFDSGNPGAVCWVNELLWREFYKHILVGYPRVSRHR
AFRLETEAVPWRDAPKDLEAWQQGCTGIPIVDAAMRQLLATGWMHNRLRMVVAMFFTKNL
LLDWRLGERFFMQHLIDGDLAANNGGWQWSASTGTDAAPYFRIFNPISQSQKFDPDGHFI
RTWVPELAGLNKRDIHDPSAMGGLFGIAEYPRPIVDLARSRERALQAFKNLPSAEMSDV
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgcgccagctgatctggctgcgcagcgacctgcgcctgcatgacaacaccgccctgagc
gctgccatggccgccggcccgaccctggcggtgtacctgatcagccccgaacagtggcgc
gagcacgacgatgcggcgtgcaaggtcgacttctggctgcgcaacctggccgccctgcac
acccagctggccgcgctcaacgtgccgctgctggtgcgccaggcgccgcactggcgcgac
gcgccgcaggtgctcggggcgctgtgccgcgaacaggcgatcgactgcgtgtgggtcaac
gaggaatacggcatcaacgagcaggcgcgcgaccgcgccgtgcagcagcacctgcgccag
cagggcgtgaatctgcggagctgcctggaccagctgttcttcgcccccggcagcgtgctg
acccaggccggcaactactttcaggtctacagccagttccgcaaggcctgctaccgcaac
ctgcacaccgccatcccgccgctggtgccgacgccgcagccacaggctccgctgcccgtc
gccagcgatgcgctgccgctggcggtggacggcttcgccacgcccgcgccggccctgcgc
gagctctggccggccggcgaggacgcagccctgcggcgcctcgccgacttcgccgaggag
cgcatggccgggtaccaggagcgccgcgactttcccgccgtcgatggcaccagccagctg
tcgccgtacctcgccgccggcgtgatctcgccgcgccagtgcctgcacgccgccctgcgc
atcaaccagggcgaattcgacagcggcaacccgggcgcggtctgctgggtcaacgaactg
ctgtggcgcgagttctacaagcacatcctggtcggctacccacgggtatcgcggcaccgc
gccttccgcctggagaccgaggccgtgccatggcgcgatgcgcccaaggacctggaagcc
tggcagcagggctgtaccggcattcccatcgtcgatgcggcgatgcgccagctgctggcc
accggctggatgcacaaccgcctgcgcatggtggtggcgatgttcttcaccaagaacctg
ctgctcgactggcgcctgggtgaacgcttcttcatgcagcacctgatcgacggcgacctg
gccgccaacaacggcggctggcagtggagcgcctccaccggtaccgacgcggcgccctac
ttccgcatcttcaacccgatcagccagtcgcagaaattcgaccccgacggccacttcatc
cgcacctgggtgccggaactggccgggttgaacaagcgcgacatccatgatccctcggcc
atgggtggcctgttcggcattgccgagtacccgcgccccatcgtcgatctggcccgctcg
cgtgaacgcgcgctgcaggccttcaagaacctgccttccgcggagatgagtgatgtctga
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