Pseudomonas alloputida: LU682_017515
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Entry
LU682_017515 CDS
T09345
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
KO
K11900
type VI secretion system protein ImpC
Organism
pald
Pseudomonas alloputida
Pathway
pald02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pald00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
LU682_017515 (tssC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pald02044
]
LU682_017515 (tssC)
Secretion system [BR:
pald02044
]
Type VI secretion system
Imp/Vas secretion system core components
LU682_017515 (tssC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VipB
VipB_2
Motif
Other DBs
NCBI-ProteinID:
WJR14988
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All DBs
Position
3808815..3810305
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AA seq
496 aa
AA seq
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MPKPSSTAITTDATADTLSNTTLLDQIMAETKLVPAQEGYQIARQGVSAFITEILKSNDP
DQLINKHRADQMIAEIDRMLGKQMDAILHQPEFQQLESSWRSLKLLVDRTDFRENIKLEI
LHVSKEDLLDDFENAADVTCSGIYKHVYTAGYGQFGGEPVAAMVGNYNFGPSSPDIKLLS
YMASVGAMSHAPFLAAPAPEFFNLNSFEELPNLKEIKDLFAGPRHAKWRAFRESEDARHV
ALTGPRFMLRSAYHPQEQPIESFNYNEDIAGQHDNYLWGNSAFLLASCINDSFARYRWCP
NIIGPQSGGAVEDLPVHLYESLGQLQAKIPTEVLISDRKEFELAEEGFIALTMRKDSDNA
AFFSANSVQKPKHFPKTPEGLQAQTNYKLGTQLPYLFIVNRLAHYIKVLQREQIGSWKER
RDLESELNKWIKQYVADQENPSADVRSRRPLRAARIEVSDVAGDPGWYQVSLAVRPHFKY
MGANFEISLVGRLDTQ
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgcccaagccaagcagcaccgccatcaccacagacgcaacggccgacacattgagcaat
accaccctgctcgaccagatcatggcagaaaccaaactggtacctgcccaggagggctac
cagattgccaggcagggcgtatctgccttcatcaccgaaatcctcaagagcaatgatcca
gatcagctgatcaacaagcaccgagccgaccagatgattgccgagatcgaccgaatgctc
ggcaaacagatggatgccattctgcatcagcctgagttccagcagcttgaatcatcatgg
cgcagcctgaaacttctggtcgaccgcacggacttcagggagaacatcaagcttgaaatc
ttgcatgtcagtaaagaggacctgctcgacgacttcgaaaatgctgctgacgttacctgc
agcggtatctacaagcatgtttacaccgcgggttatggccaattcgggggagagccggtt
gcggccatggtaggcaactacaacttcggcccctcttcccctgacatcaagttgctaagt
tacatggcctccgttggcgccatgtcccatgccccttttcttgctgcacctgcccccgaa
ttcttcaatttgaacagcttcgaggagctgcctaacctcaaggaaataaaagacctcttc
gccggccctcggcatgccaagtggcgcgcttttcgtgaaagcgaagacgcccgccacgtc
gccctgaccgggccgcgcttcatgcttcgctccgcttaccacccgcaggaacaaccgatc
gagagcttcaactacaacgaagacatcgccgggcagcacgacaactacctgtggggcaat
tctgcttttctgttagccagttgcatcaacgacagcttcgcccgctaccgctggtgcccg
aacatcatcggcccccaatccggcggtgctgtcgaagacttgccggtccatctgtacgaa
tccctgggccagttgcaggccaagattcctaccgaggtgctgatatccgaccgcaaggaa
ttcgaactggccgaagagggcttcatcgccctgaccatgcgtaaagacagcgacaacgcc
gcgttcttctccgccaactcggtacaaaagcccaagcacttcccgaaaacccctgagggg
cttcaggcacagaccaactacaagctgggtacccagttgccctacctgttcatcgtcaac
cggctcgcccactacatcaaggtgctgcagcgcgagcagatcggcagttggaaagagcgc
cgtgaccttgagtccgagctgaacaaatggatcaagcagtacgtcgccgaccaggagaac
ccgtctgccgacgttcgcagccgccggccgctgcgtgccgcccgtattgaggtctcggat
gttgcgggtgacccgggctggtaccaggtttcgctcgccgtacgcccgcacttcaagtac
atgggcgcgaacttcgagatttccctggtcgggcggctcgatacgcaatga
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