Pantoea alfalfae: K6R05_11960
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Entry
K6R05_11960 CDS
T09440
Symbol
sdiA
Name
(GenBank) transcriptional regulator SdiA
KO
K07782
LuxR family transcriptional regulator, quorum-sensing system regulator SdiA
Organism
palf
Pantoea alfalfae
Pathway
palf02020
Two-component system
palf02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
palf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
K6R05_11960 (sdiA)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
K6R05_11960 (sdiA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
palf03000
]
K6R05_11960 (sdiA)
Transcription factors [BR:
palf03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
K6R05_11960 (sdiA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autoind_bind
GerE
HTH_23
Motif
Other DBs
NCBI-ProteinID:
QZX94485
LinkDB
All DBs
Position
complement(2553068..2553790)
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AA seq
240 aa
AA seq
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MSTENYFAWRNEVKEKFQALTASSELKTLLQQFTESLGFDYFAFLIQHPVPFTRPRFHLH
STYPKLWVKRYEKQNYYAVDPVLTLCQRPGRGMAWIEEQFADAGNLWQEAREYGLQSGFS
CSAMAPNRVIGILSISSQQPISVQLRHAELEVKLHLLAELSLDTLERFNDDAMMVLRKTF
SQRELEILKWTAEGKTAVEISLILSISEHTVNFHQKNMQKRFNVSNKTQIACYAAAIGLI
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgagtactgaaaactatttcgcctggcgaaatgaggtgaaagaaaaatttcaggcgtta
acggcttcttctgaattgaagacgttattgcaacagtttactgaatcactaggcttcgat
tattttgcctttttgattcagcatccggtgccatttacccggccgcgttttcatttacat
agcacctatcccaaattatgggttaaacgttatgagaagcagaattattacgctgtcgat
ccggtgctcacattgtgtcagcgaccgggcagagggatggcctggatagaggaacagttc
gctgacgccggcaatctttggcaggaggcgagagagtatgggctccagagcggattttct
tgctccgcaatggcaccaaatcgcgtcattggtatattatctatatcgtcgcaacagccc
atttctgtccagctccgccatgctgagctggaggtgaaactacaccttttagcggaacta
agcctggatacgctggaacgctttaacgatgatgcaatgatggtactaagaaaaacgttt
agtcagcgcgagttggaaattctgaaatggacagccgaaggaaaaacggcggtcgaaatt
tcacttattttatccatctctgaacataccgttaactttcaccagaaaaatatgcaaaag
cgtttcaatgtttccaataaaacgcagattgcctgctatgcagcggcaatcggactgatt
tga
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