Parasphingopyxis algicola: HFP57_11040
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Entry
HFP57_11040 CDS
T06669
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
palg
Parasphingopyxis algicola
Pathway
palg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
palg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
HFP57_11040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
palg03400
]
HFP57_11040
Enzymes [BR:
palg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
HFP57_11040
DNA repair and recombination proteins [BR:
palg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
HFP57_11040
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Gly_transporter
RecJ_OB
Motif
Other DBs
NCBI-ProteinID:
QLC25501
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Position
complement(2239274..2240680)
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AA seq
468 aa
AA seq
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MQSSSSEHGRNESGAALLAETATGDNAPPLSVSEISQALKRAVEQRFGHVRVRGEISGFK
RAASGHCYMGLKDESAVIDGVIWKGQAARLAFVPEDGVEVIATGKLTTYPGRSKYQIVIE
RLEVAGEGALMQLLEQRRKALAAEGLFADERKQRLPFLPRVIGVVTSPTGAVIRDILHRL
ADRMPSHVVLWPVIVQGEGAAEQVARAVTGFNAMAEGDVVPRPDLLIVARGGGSIEDLWA
FNEEVVVRAIADSAIPVISAVGHETDTTLADFAADRRAPTPTAAAEIAVPVRAELLAMLA
QASLRASTAIRRHVDRLAERAANVVRLLPKRESLFTVQAQRVDELAERLPRVLGTRLELA
QAFLARRADRLRPNLVRARIADGETRLEGLSRLLDQLHPERPLERGYAKVTARDGATLVN
ATGVRKAKAVTLHFSDGAVDARVEEAGKAPYSKPRKSASKPGQPGLFD
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcttcctcttcagaacatggccgcaacgagtccggcgctgcgctcctagcggag
actgcgacgggcgacaatgcaccgccgctgtcggtttccgaaatatcgcaggcgcttaaa
cgggcggtggaacagcgctttggccatgtccgggtaaggggcgaaatatcgggcttcaag
cgcgccgcttccggccattgctatatggggctgaaggacgagtccgcggtaatcgacggc
gtgatctggaaggggcaggcggcccgtctcgccttcgtgccggaggacggggtcgaggtg
atcgccactggcaagctcaccacctatccgggccgctccaaatatcagatcgtgatcgag
cggctcgaggtcgccggcgagggcgcgctgatgcagctgctcgaacagcggcgcaaggcg
ctggcggccgaaggcctgttcgccgatgagcggaagcaacgcctgccgtttctcccccgc
gtcatcggcgtggtcacctcgccgacgggcgccgtcatccgcgatattctccatcggctg
gccgatcgcatgccgagccatgtggtcctctggcccgtgatcgtgcagggcgaaggtgcc
gccgagcaggttgcgcgagccgtgaccggcttcaacgcgatggcggagggcgatgtcgtg
ccgcgacccgatctgctgatcgtcgcgcgcggcggcggttcgatcgaggatctctgggcc
ttcaacgaggaggtcgttgtgcgggcgatcgccgatagcgctattcccgtgatttccgca
gtcggccatgaaaccgataccaccctggcggatttcgcagcggaccggcgagcgccgacg
ccgacggccgccgccgagatcgcggttccggttcgcgccgaactgctcgcgatgctggcc
caggcgtcgctcagggcgtcgaccgcgatacgccgccatgtcgaccggctcgccgagcgc
gcggccaatgtcgtgcggctgctgccgaaacgcgagagcctgttcacggttcaggcgcag
cgggtcgacgagctggccgaacggttgccgcgggtgctggggacgcggctcgaactcgcc
caggcttttctcgcgcggcgagcggatcgtctccggcccaatctggtgcgtgcacgcatt
gccgatggggaaacccggctggaagggctgtcgcgccttctcgatcaattgcatcccgaa
cggccgctcgaacgcggctatgcgaaggtaaccgcgcgcgacggcgcaacgctggtcaat
gcgaccggcgtccggaaggccaaggccgtgaccctgcatttctcggacggcgccgtcgat
gcacgggttgaggaagcgggcaaggcgccatattctaagccgcgtaaatcggcgagcaaa
cccggacaaccgggcctgttcgactag
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