Pseudomonas alkylphenolica: PSAKL28_21390
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Entry
PSAKL28_21390 CDS
T03238
Name
(GenBank) LysM domain protein
Organism
palk
Pseudomonas alkylphenolica
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
Motif
Other DBs
NCBI-ProteinID:
AIL61360
UniProt:
A0A077FA05
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All DBs
Position
complement(2345624..2349016)
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AA seq
1130 aa
AA seq
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MELINHTVKAGDTLHDISERYGCSVAQLRQLNPFIIDIIHPGWTLSVPVQGGGTAQISAT
PPSTTYTEPENPPAPAPPAKPLELDPQTKPKPSASICFAPQEKLACSPVYADIIYATQEK
TFWLLSAEAASALKEAASKLDNLIAPGKSPEERQKGLYACDLLDYFLEPKLANFLEGEQQ
ARMLAIEAEEPLIADPRYAMQVRTAAEDKQRDIAAKSAGAVDPYARDTAWEDNERMLDNH
KKYQTLRKLHQEWKHLATIAQAQAKRQGYVIEGGSLFTPEALKARDIVQVYLSERAKLLD
DKGQLSTFSTDEVARVLQAASEHRNRLESCLLQCEAELVTYYALQTQEAAKFAYPKYLEA
ILNAADYGIALPELALCQGADLDAGVQALKHYLALQLQQTQIKQRLSDKYETWIKASGEN
TKAPDSLVAGERSAWVDLQTQLEAIHQQAQSNVLSTVPRRHLLWEPEQFKPTPVERLVKP
DFPLREISWPASSSPVRHISLTVLKALKEQSAVKWGANSAGKSAKDRAHSDFHDWLKSMG
GVPIADQGEWFDNEGCFDVEQFHSQLTEQGYEVKTLASADQRNAWGEQLRQMLFMAGAQR
ELRLFDSSPQAQLIRCLTPKIANVQQTVSASSRFSPNGIGASAQLQVEVNLAKGEVELFK
LDWPERGVAQDINIQYQRYDGQGVAEMNIGRFSFNVAAHAWGFAGAAMLASTSIALTPSN
TRYGAGLSALQDAQAPAGVLSAAHTQKSAPVLTGKAANVQINDGATAAFNLFAGVQAGIR
LTGVLNWAPPKDLVALRTVSLQSTTSQRAQHMGNQWLSLARLEGEVAAAAGVGASAAFSL
SADKGRLILRLKAALIFGPGAKGTFAFEVGYDAIYELLNLFRRELRKNYGQPLDWVDGSA
MDLFSKMNLLGMAGLDPGMLYLMGFDKIAELFEALTSAGKGGPIAHTIMNYGYPAELEQW
TVDAIPEALGPMLMTLISEAKAFDVVSYEVDPLTGLSAEVKTHYTQSQAWMLQQKAIDRL
LNWIVSNAQKKGNLAKAQLQFEETFMRMSRFGTKSKTPGQSYCENRFKMDNFMAEGVQRL
FDPDADFIRANYKKNAALLGSEKDIFCARRGYYGKDYLPGGVAKYTGEGQ
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atggaattgatcaaccacaccgtcaaagcaggcgatacgctccatgacatttcagagcga
tatggttgtagcgttgcgcagctgcgtcagttaaatccattcatcatcgatattatccat
ccgggctggaccctcagtgttcctgttcaaggtggtggaaccgcgcagatcagcgcaaca
cctccctccacaacctacaccgagcctgaaaacccgcctgcgccagcgccgcccgccaag
cccctcgagctggacccgcagaccaagcccaaaccctccgcgagcatctgttttgcccca
caggaaaagctcgcctgctctcctgtatacgccgacatcatttacgccactcaagagaaa
accttctggctgctgtcggctgaggcagccagcgcactcaaggaagccgccagcaagctg
gataacctgattgccccgggcaaaagcccggaggagcgccagaaaggtctgtacgcctgc
gatctgctggactattttctcgagcccaaactggccaacttcctcgagggtgagcagcag
gcgcggatgctcgcaatcgaggctgaggaacccctgattgcagatcctcgttatgccatg
caggtcaggacagcggctgaagacaaacagcgtgatatcgccgccaaaagtgctggggcc
gttgatccatacgcgcgcgacacagcgtgggaagacaacgagcggatgctcgataaccac
aagaaataccagactctgagaaagcttcaccaggaatggaaacacctggccaccatcgcc
caggcgcaagcaaagcgtcagggctacgtgatcgaaggcggctcactgtttacccctgaa
gccctcaaggcccgcgatattgttcaggtttacctgagcgagcgcgccaaattgctggac
gacaaagggcaactcagcaccttctcgaccgatgaggtggccagggtcctgcaagccgcc
agcgaacaccgaaatcgcctggaaagctgcttgctccaatgtgaagcagagctggtgacc
tactacgccttgcagacccaggaagcggcaaaattcgcctacccgaagtacctcgaagcg
attctcaacgcggccgactatggcattgccctgccagaactggcgttgtgccagggcgcg
gatctggatgcgggggtgcaagcactcaagcactacctagcgcttcaactgcaacaaacc
cagatcaagcaacgtctgtccgacaagtacgagacctggatcaaggccagcggtgaaaac
accaaagcgcctgacagcctggtggcaggcgaacgtagcgcctgggtcgatctgcaaacc
cagctggaggccatccaccagcaggcgcaaagcaatgtcctgtcgaccgtgccccggcga
catttgctctgggagcccgaacagttcaagcccacgccggtagaacgcctggtcaaacct
gacttcccgttgcgagaaatcagctggcctgccagcagctcaccggtgcgccatatcagc
ttgacggtactcaaagcgctgaaggagcaaagcgcggtcaaatggggcgcaaacagtgcg
gggaagtccgcgaaagaccgggcccacagcgactttcatgactggctcaagtccatgggg
ggcgtacccattgccgaccagggtgagtggttcgacaacgagggttgtttcgatgtcgag
cagttccacagccaactgaccgaacaaggctacgaggtcaaaaccttggccagtgccgac
cagcgcaacgcctggggtgagcaactgcggcaaatgctgttcatggccggggcgcagcgc
gaactgcgcttgttcgacagcagcccgcaagcccagttgatacgttgcctgaccccaaag
attgccaatgtgcaacaaaccgtcagtgccagcagccgtttctcccccaacggcataggc
gcctcggcacagctacaggttgaggtgaacctggccaagggtgaagtcgaactgttcaag
cttgactggccggagcgcggtgtggcccaggacatcaacattcagtaccagcgctacgat
ggccaaggcgtagccgagatgaacatcgggcgtttttctttcaacgtcgctgcgcatgcc
tggggctttgccggcgcggccatgctggcctcaaccagtatcgctctaacccccagcaac
acccgctacggcgccgggcttagcgccttgcaggatgcccaggcgccggcaggcgtcctc
tctgctgcgcatacccagaaaagcgcaccggtactcaccggcaaggcggccaatgtacag
atcaacgacggcgccactgccgcctttaacctgtttgccggtgtgcaggcaggcattcgc
ctgaccggcgtactgaactgggcgccgccgaaagatctggttgcgctgcgcaccgtttca
ttgcaatcaacgacctcacaacgcgcccaacacatgggcaatcaatggctcagcctggca
cgcctggaaggtgaagtcgccgctgctgcgggggtcggtgcgtccgcagcgttcagccta
tctgccgataaaggacggctgatcctgcgcctcaaagccgccttgatctttggccccggc
gccaagggcacgtttgcctttgaggtgggatacgacgccatctatgaactgttgaacctg
ttccgacgcgaactgcgcaaaaactacggccagccactggactgggtggatggcagcgcg
atggacctgttcagcaaaatgaacttgctggggatggcaggcctggatccgggcatgctt
tacctgatgggcttcgacaagattgctgaactttttgaggcgcttacttctgcgggtaag
ggtgggccgatagcgcacaccattatgaactacggctaccccgctgagttggagcaatgg
accgtggacgccatcccggaagccttgggtccgatgttgatgacgttgatcagtgaggcg
aaagcgtttgatgtcgtttcttatgaagtcgatcctctaaccggactgtcggcagaagtc
aaaacccactacacccaatcacaggcgtggatgctacagcagaaagcaatcgaccggctg
ttgaattggatcgttagcaacgcacagaaaaaaggcaatctggccaaagctcaactgcag
tttgaagaaacgtttatgcgaatgagccgctttggcaccaaatcgaaaacacccggccag
tcctattgtgagaacagattcaaaatggataattttatggctgaaggagttcagcgactt
ttcgacccggacgctgacttcatccgcgcaaactacaagaaaaatgcagcactacttgga
agcgaaaaagatattttctgtgctcgccgagggtattacggaaaggactacctcccaggt
ggcgtcgcaaaatatacaggggagggacagtaa
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integrated database retrieval system
