Pseudoalteromonas aliena: B0W48_12485
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Entry
B0W48_12485 CDS
T04815
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K10941
sigma-54 dependent transcriptional regulator, flagellar regulatory protein
Organism
paln
Pseudoalteromonas aliena
Pathway
paln02020
Two-component system
paln02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
paln00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
B0W48_12485
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
B0W48_12485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
paln03000
]
B0W48_12485
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
paln02035
]
B0W48_12485
Transcription factors [BR:
paln03000
]
Prokaryotic type
Helix-turn-helix
Other families
B0W48_12485
Bacterial motility proteins [BR:
paln02035
]
Flagellar system
Flagellar assembly proteins
Others
B0W48_12485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
FleQ
Sigma54_activ_2
HTH_8
AAA_5
HTH_50
Mg_chelatase
AAA_16
AAA_7
MCM
AAA
bpMoxR
TIP49
AAA_3
Motif
Other DBs
NCBI-ProteinID:
AQQ00547
UniProt:
A0A1Q2GZM7
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All DBs
Position
2779135..2780571
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AA seq
478 aa
AA seq
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MILILDNNNNRSIGLNASLTFIGEAVQLLDEANFEQECAKYQQKECIVILGALQSLDHES
LIKCYPTLPFLLIGETLKPLLSIANVVGLICEPFSHEVTTQLLHDCQQYQRMLPSDHKHS
KPHKTFDGLVGETDAVKDVRFLIEQVAKTDANVLILGESGTGKEVVARNVHLLSKRSAGP
FVPVNCGAIPAELLESELFGHEKGAFTGAISARKGRFELAQGGTLFLDEIGDMPLQMQVK
LLRVLQERSYERVGGTKAIQADVRVIAATHRNLENMIEEGSFREDLYYRLNVFPIENPSL
SERADDIPLLLKELMRRVNDQTGSTAKFTERAVDSLKEHAWPGNIRELANLVERMVIMFP
EKVVDIPDLPNKYRYIEVEAYEPEYPEELMEKDAFNDIFSTGFSDYDEEPEPEFNQSGSG
LLPGDGIELKEYLAELEISLITQALERFDYVVARAAEILGVRRTTLVEKMKKYNLSRD
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgatcttgattttagataataataacaaccgctcgatagggttaaatgcatcacttact
tttattggtgaagctgttcaacttttagacgaagcaaattttgagcaagaatgtgcgaag
tatcaacaaaaagaatgcattgtaattttaggtgccttgcaatcactcgatcatgaaagc
ttaattaagtgttatccaacactgccatttttgctaataggcgaaacgctaaaaccatta
cttagtatcgccaatgtagtcggacttatttgtgagccatttagtcatgaagtaacaacg
cagttgcttcacgattgtcagcaatatcagcgaatgcttcccagtgaccataaacactct
aaaccgcataaaacttttgatggccttgtgggtgaaaccgatgcagttaaggatgtacgc
tttttaattgagcaagttgcaaaaactgacgcaaatgttttaattttaggcgaatcggga
actggtaaagaagttgttgcacgcaatgtacatttactatcaaaaagaagcgctgggccg
tttgtgccagtcaattgtggtgcgatcccagctgaacttttagaaagtgaattgtttggc
catgaaaagggcgcatttacaggggctatttcggcgcgtaaaggccgatttgaactagca
caaggtggcacgctatttttagatgaaataggcgatatgccattgcaaatgcaagtaaag
ttattgcgtgttttacaagagcgcagctatgaacgtgttggtggtactaaggcgattcag
gcagatgtacgtgtaattgctgcaacgcatcgtaacctagaaaatatgattgaagaaggt
agttttcgtgaagatttatactatcgcttaaatgtatttcctatcgaaaatccatcgctt
agtgagcgcgctgatgatattccattgctgctaaaagagttaatgcgccgtgttaatgat
caaacaggatcaacggctaaatttaccgagcgtgcagttgatagtctaaaagagcatgcg
tggcctgggaatattcgtgaactcgctaatttagttgagcgcatggtgattatgttccct
gaaaaggtagttgatattcctgatttacctaataaatatcgttatattgaggttgaagca
tacgagccagaatacccagaagagttaatggaaaaagatgcgtttaacgatatatttagt
actggttttagtgattatgacgaagagcctgagcctgaattcaaccaatctggaagtggt
ttactacccggtgacgggatcgaacttaaagagtatttagctgagcttgaaattagctta
attacccaagcactagagcgttttgattacgtcgttgctcgtgctgctgaaatattaggt
gtacgcagaacaaccttagttgaaaaaatgaaaaagtataacctatcgagagactag
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