Paenibacillus algicola: E6C60_3350
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Entry
E6C60_3350 CDS
T07807
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
palo
Paenibacillus algicola
Brite
KEGG Orthology (KO) [BR:
palo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
E6C60_3350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
palo03400
]
E6C60_3350
DNA repair and recombination proteins [BR:
palo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
E6C60_3350
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
QCT04061
UniProt:
A0A4P8XQQ2
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All DBs
Position
3513249..3514175
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AA seq
308 aa
AA seq
DB search
MHTVWKGAISFGLVHVPVKMFSATEDKDISMKYLHKVCGSPLSYVRKCPVCEEEVAWEDI
SKGYEYEKGRFVLFEKEELEQLTDANSKSITILDFVNLTDIDPIYFQKTYYLSPDQAGSN
AYRLLLEAMRLSGKIGIAKIAIRSKSSLAAVRVLDECLVIETIFYPDEIRPLSQVPNLPE
GVTVNDKELTMARMLIEQLSTPFEPGKYTDDYRERLLGAIQSKIAGEEIKVAPAAQESNV
VDLMAALQASIEAVKPIATDPGDAGKKRKPARKPAAAAAAKVSGDVGAAPPAKPKRQSRK
AKSPEAGS
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgcataccgtctggaagggtgccatcagcttcggattggtccatgtccctgtcaaaatg
ttctccgccacagaagataaggatatttcgatgaaatatctacataaagtctgcggcagc
ccgctgtcctatgttcgcaaatgccccgtgtgcgaggaggaagtggcatgggaggacatc
agcaagggctatgagtatgagaagggacgctttgttctttttgaaaaagaagagctcgag
cagctcaccgatgcaaacagcaagagtattacgattcttgactttgtgaatttgacggat
attgatccgatttatttccagaagacgtattatctctctcccgatcaggcagggtccaat
gcataccgcctgctgctggaggctatgcggctgtcgggcaaaatcggcatcgccaaaatc
gccatccgctccaagagcagcctcgctgccgtccgcgtgctggatgaatgcctcgtgatc
gagacgattttttatcccgatgagattcggccgctgtcacaggtgcccaacctgccggaa
ggcgtcaccgtcaatgacaaggagctgaccatggcgcgcatgctgatcgagcagctgtcc
acgccgtttgagccgggaaagtatacagatgattaccgggaacggctgcttggtgcgatc
cagagcaagattgcgggcgaggaaattaaggtcgctccggcggcgcaggagagcaatgtt
gtcgatctgatggcagccttgcaggccagcattgaggctgtcaagccgattgcgacggac
cccggggacgccggcaaaaagcgcaagcctgcccggaagccggcggctgcagctgcggcc
aaggttagcggggacgtcggcgccgctcccccggccaagccgaagcggcagagccgtaaa
gccaagtcaccggaagccggctcctga
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