Paracoccus alcaliphilus: JHW40_04020
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Entry
JHW40_04020 CDS
T08960
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
palp
Paracoccus alcaliphilus
Pathway
palp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
palp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JHW40_04020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
palp03400
]
JHW40_04020
Enzymes [BR:
palp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
JHW40_04020
DNA repair and recombination proteins [BR:
palp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
JHW40_04020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
WCR18884
LinkDB
All DBs
Position
complement(755303..756088)
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AA seq
261 aa
AA seq
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MFTIATWNINSVRLREGLVARLLQEEAPDILCLQECKSPVEKIPLEAFRALGYNWIVARG
QKGYNGVATLSRLPIEDAGDRDYAKLGHARHVAARLENGVTIHNMYVPAGGDIPDRELNP
KFGQKLDFVSEMRDVFHADRPERAIMVGDFNIAPREDDVWSHKQLLKIVSHTPIEVDHLL
SAQDAGKWVDITRKDIPEGQLYSWWSYRARDWDAADKGRRLDHIWASPDIANAGHSSRIL
RPVRGWEKPSDHVPVLATFDL
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgttcaccatagccacctggaacatcaactcggtccgcctgcgcgaaggactggtcgcc
cgcctgctgcaagaggaggcgcccgacatcctctgccttcaggaatgcaagtcgccggtc
gagaagatcccgctcgaagccttccgcgcgcttggctacaactggatcgtggcgcggggg
caaaaaggctataacggcgtcgccaccctgtcgcgcctgccgatcgaggatgcgggcgac
cgcgactatgccaaactgggccatgcccgccatgtcgcggcccggctggaaaacggcgtc
accatccacaacatgtacgtgcccgcgggtggcgatattcccgaccgcgagctgaacccg
aaattcggccagaaactcgatttcgtgtccgagatgcgcgacgtcttccacgccgaccgg
cccgaacgcgcgatcatggtcggcgatttcaacatcgccccgcgcgaggacgacgtctgg
tcgcacaagcagcttctcaagatcgtcagccacaccccgatcgaggtcgatcacctgctg
tcggcacaggacgcgggcaaatgggtggacatcacccgcaaggacatccccgaaggccag
ctctattcatggtggagctatcgcgcccgcgactgggacgccgccgacaagggccgccgc
ctcgaccatatctgggccagccccgatatcgccaatgccggccattccagccgcatcctg
cgcccggtgcgcggctgggaaaaacccagcgaccatgtcccggtcctcgccaccttcgat
ctctga
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