Pseudomonas alvandae: KSS97_10035
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Entry
KSS97_10035 CDS
T07736
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
palv
Pseudomonas alvandae
Pathway
palv00071
Fatty acid degradation
palv00280
Valine, leucine and isoleucine degradation
palv00310
Lysine degradation
palv00362
Benzoate degradation
palv00380
Tryptophan metabolism
palv00410
beta-Alanine metabolism
palv00640
Propanoate metabolism
palv00650
Butanoate metabolism
palv00907
Pinene, camphor and geraniol degradation
palv00930
Caprolactam degradation
palv01100
Metabolic pathways
palv01110
Biosynthesis of secondary metabolites
palv01120
Microbial metabolism in diverse environments
palv01200
Carbon metabolism
palv01212
Fatty acid metabolism
Module
palv_M00087
beta-Oxidation
palv_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
palv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
KSS97_10035 (fadB)
00650 Butanoate metabolism
KSS97_10035 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
KSS97_10035 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
KSS97_10035 (fadB)
00310 Lysine degradation
KSS97_10035 (fadB)
00380 Tryptophan metabolism
KSS97_10035 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
KSS97_10035 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
KSS97_10035 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
KSS97_10035 (fadB)
00930 Caprolactam degradation
KSS97_10035 (fadB)
Enzymes [BR:
palv01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
KSS97_10035 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
KSS97_10035 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
KSS97_10035 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
KSS97_10035 (fadB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
QXI55246
LinkDB
All DBs
Position
2240496..2242643
Genome browser
AA seq
715 aa
AA seq
DB search
MIYEGKAITVKALESGIVELKFDLKGESVNKFNRLTLNELRQAVDTIKADASIKGVIVSS
GKDVFIVGADITEFVDNFKLPDAELIAGNLEANRIFSDFEDLNVPTVVAINGIALGGGLE
MCLAADYRVMSTTAKIGLPEVKLGIYPGFGGTVRLPRLIGADNAIEWIAAGKENRAEDAL
KVGAVDAVVEPGKLQEAALETVKRAISGEFDYKAKRQPKLEKLKLNAIEQMMAFETAKGF
VAGQAGPNYPAPVEAIKTIQKAANFGRDKSLEVEAAGFVKLAKTSAAQSLIGLFLNDQEL
KKKAKAYDEIARDVKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKL
LVGRVDKGRMTAAKMAEVLNGIRPTLSYGDFGHVDLVVEAVVENPKVKQAVLAEVEDKVK
EDTILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSELAIATTVA
YAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKIMEKFGWPMGPAYL
MDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAVDVLYEVKRLGQKNGKGFYAYETDKRGKQ
KKVADSSVLEVLKPIVYEQREVTDEDIINWMMIPLCLETVRCLEDGIVETAAEADMGLVY
GIGFPPFRGGALRYIDSIGVAEFVALADQYADLGALYHPTAKLREMAKNGQSFFG
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgatttacgaaggtaaagccatcacggttaaggctcttgaaagtggcatcgtcgaattg
aaattcgacctcaagggtgagtccgtcaacaagttcaaccgtctaaccctgaatgaattg
cgtcaggccgtggacactatcaaggcagatgcttcgatcaagggtgtgatcgtcagcagt
ggcaaggacgtgttcatcgtcggcgccgacatcaccgaattcgtcgacaacttcaagctg
cccgatgccgaactgatcgctggcaacctcgaagcgaaccgtatcttcagcgacttcgaa
gacctcaacgtaccgaccgtcgtggccatcaatggcatcgccctgggtggcggcctggaa
atgtgcctggcggcggattaccgtgtcatgtccaccacggccaagatcggcctgccggaa
gtcaagctgggcatctacccaggctttggcggtaccgtgcgcctgccgcgcctgattggt
gccgacaacgccatcgaatggattgccgctggcaaggaaaaccgtgccgaagacgcgctg
aaggtcggtgccgtagacgccgtggttgaaccaggcaagctccaggaagcggcgcttgag
actgtcaaacgcgccatcagcggtgagttcgactacaaggccaagcgccagccgaagctt
gaaaaactcaagctcaacgccattgaacaaatgatggccttcgaaaccgccaagggtttc
gtagccggtcaggcgggcccgaactacccggcgccggtcgaagcgatcaagaccatccag
aaagccgcgaatttcggtcgcgacaagtccttggaagtcgaggccgccggcttcgtgaaa
ctggccaagacctccgccgcgcagagcctgatcggtctgttcctcaatgaccaggaactg
aagaaaaaggccaaggcctatgacgaaatcgcccgcgacgtgaagcaggccgccgtgctc
ggcgccggcatcatgggtggcggtatcgcctaccagtcggcgtccaaaggcacgccgatc
ctgatgaaggacatcaacgaacacggcatcgagcagggtctggcggaagctgccaagctg
ctggtcggccgcgtcgacaaaggccgcatgaccgccgcgaaaatggctgaagtgctcaac
ggcatacgtcctacgctgtcctacggcgatttcggccatgtcgacctggtggtcgaagcc
gtcgtcgagaacccgaaggtcaagcaagcggtactggctgaagtcgaagacaaagtcaaa
gaggacaccatcctcgcctcgaacacctcgaccatttccatttcgctgttggccaaggcc
ctcaagcgtccggaaaacttcgtcggcatgcacttcttcaacccggtgcacatgatgccg
ctggtggaagtcatccgtggcgaaaaatcgagcgaactggcgatcgccaccaccgtggcc
tacgccaagaaaatgggcaagaacccgatcgtcgtcaacgactgcccgggcttcctggtc
aaccgcgtgctgttcccgtatttcggcggttttgccaagttggtcagtgccggcgtggac
ttcgtgcgcatcgacaagatcatggaaaaattcggctggccgatgggcccggcgtacctg
atggacgtggtcggcatcgacaccggccaccacggtcgcgatgtcatggccgaaggcttc
ccggaccgcatgaaggacgaccgccgttcggccgtcgacgtgctctacgaagtcaagcgc
ctcggccagaagaatggcaagggcttctacgcctatgagaccgacaagcgcggcaagcaa
aagaaagtcgccgactcgtcggtgctggaagtgctcaagccgatcgtctacgagcagcgc
gaagtcaccgacgaggacatcatcaactggatgatgatcccgctgtgcctggaaaccgtg
cgttgcctggaagatggcattgtcgaaaccgccgccgaagccgacatgggtctggtctac
ggcatcggtttccctccattccgtggcggtgcgctgcgctacatcgattcgatcggtgtg
gccgagttcgttgccctggctgaccagtacgctgatctgggcgcgctctaccacccgacc
gcgaagctgcgtgaaatggccaagaacggccagagcttcttcggttaa
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