KEGG   Pseudomonas alvandae: KSS97_22770
Entry
KSS97_22770       CDS       T07736                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
palv  Pseudomonas alvandae
Brite
KEGG Orthology (KO) [BR:palv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:palv03400]
    KSS97_22770
Enzymes [BR:palv01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     KSS97_22770
    5.6.2.6  RNA 3'-5' helicase
     KSS97_22770
DNA repair and recombination proteins [BR:palv03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    KSS97_22770
SSDB
Motif
Pfam: Lhr_WH DEAD_assoc DEAD Helicase_C ResIII AAA_25
Other DBs
NCBI-ProteinID: QXI52330
LinkDB
Position
5141236..5143722
AA seq 828 aa
MATSSNFAKQWFDARGWKPFAFQKHVWAAVKRGESGLLHASTGAGKTYAVWFAALNRFAR
SVPPPDKPRKRKPPAEPLTVLWITPMRALAADTAKALEAPLTPLQIPWSVGLRTGDTSAS
ERARQGRRLPTALITTPESLTLMLARADAQTAVSTLRMVVVDEWHELLGNKRGVQLQLAL
ARLRRWHPGLIVWGVSATLGNQAHAEQVLIPQGNGVSVQGANGKALQVDTLLPPTLERFP
WAGHIGLKMLPQVVAEIDASGSCLVFTNTRAQSEIWYQAILDARPDWAGLIALHHSSLSR
DTRDWVERALKDGQLKAVVCTSSLDLGVDFLPVERVMQIGSAKGVARLMQRAGRSGHAPG
RTSRITLVPTHSLELVEAAAAQDAAAQRRIEPRESPDKPLDVLVQHLVSMALGGGFTPDE
LFDEVRSAWAYRNLNLAEWAWALAFVRHGGLSLTAYPDYRRVEPDEHGIWRVPDARLARR
HRMSIGTIVSDASLQLKFWSKGGGGKTLGSVEEGFIARLRPGDGFLFAGRLLELVRVEDM
TAYVRRSQAKKAAVPRWNGGRMPLSSELAAAVVARLSEAAAGHFDGPEMQAAQPMLSTQL
RWSGLPTQGTLLAETLKSREGWHLFLYPFAGRQVHLGLASLLAWRVSQRQPVTFSIAVND
YGLELLSATELDWSAHLNPTLLRTDHLLDDVLASLNAGELALRRFREIARIAGLVFAGYP
GAPKSTRQVQASSGLFFQVFKQYDADNLLLAQAGEEVLREELDIRRLEQTLERLDTLKLD
LHVIKRPTPLGFPLLVERFRESMSSEKLADRIRRMVSELERTADRGTA
NT seq 2487 nt   +upstreamnt  +downstreamnt
atggcgacatccagcaacttcgcgaaacagtggttcgacgcccggggctggaagccgttc
gcttttcaaaaacacgtgtgggccgccgtcaagcgcggcgagtcggggctgctgcatgcc
agcaccggcgccggcaagacctacgccgtctggtttgccgccctcaatcgtttcgcgcgc
tcagtgccgccgccggataagccgcgcaaacgcaaaccgccggccgagccgttgacggtc
ttgtggatcacgcccatgcgggccttggccgccgacaccgccaaagccctcgaagcgccg
ctcacgccgttgcaaatcccatggagcgtcggcctgcgcactggcgacaccagcgccagc
gagcgcgcccgccaaggccggcgcctgcccactgcgctgatcaccacaccggaaagcctg
acgctgatgctggcccgtgccgatgcgcaaaccgccgtctcgaccctgcgcatggtcgtg
gtggatgaatggcacgaactgctcggcaacaagcgtggcgtccagttgcaattggcgttg
gcgcgcctgcgacgctggcatcccgggctgattgtgtggggcgtatccgcgaccttgggt
aatcaggcacacgccgagcaagtccttatcccgcaaggcaacggggtcagcgtgcagggc
gccaacggcaaagccctacaggtcgatacgctgttgccaccgaccctcgagcgctttcca
tgggccgggcacatcggcttgaaaatgctgcctcaggttgtcgccgaaattgacgccagc
ggcagttgcctggtcttcaccaacacccgcgcgcaatcggaaatctggtaccaggccatt
ctcgatgcgcggccggattgggccgggctgattgcgctgcaccacagctcgttgtcccgt
gatacccgcgactgggtggagcgagcgttgaaggacggccagctcaaggccgtcgtgtgc
acgtccagcctggacctcggcgtggatttccttcccgtcgaacgcgtgatgcagatcggc
tcggccaaaggcgttgcgcgactgatgcaacgcgccgggcgctccggccatgcgccggga
cggacctcgcggataaccctggtgcccacccatagcctggagctcgtcgaggctgccgct
gcccaggacgccgcggcacagcgacgcatcgaaccgcgggaatcgcccgacaaacccttg
gatgtcctggtccagcacctggtcagcatggccctgggcggcggtttcactcccgatgag
ctgttcgacgaggtccgtagcgcctgggcctaccgcaacctgaacctggctgaatgggcc
tgggccctggcgttcgttcgtcacggcgggttgtcgctgacggcctaccccgactaccga
cgggtcgaaccggacgaacacggcatctggcgcgtccccgacgcccgcctggccaggcgt
catcgcatgagcatcggcaccatcgtcagcgacgccagcctgcaactgaagttctggagc
aagggcggtggcggcaagaccctgggcagcgtggaagaaggtttcatcgcacgcctgcgg
cccggcgatggtttcctgtttgccggccggctgctagagctggtccgggtggaggacatg
accgcctacgtgcggcgcagccaggcgaagaaagccgccgtaccgcgctggaacggtggg
cgcatgccgctttccagcgagctcgccgcagctgtcgtggcgcgcctgagcgaagccgcc
gccggtcatttcgacggcccggaaatgcaagcggcgcagcccatgttgagcacgcaactg
cgctggtccggtttgcccacgcaaggcacgttgctggccgaaaccctcaaatcccgggaa
ggttggcacttgttcctgtatccattcgccggacgccaggttcacctgggactcgccagc
ttgctggcctggcgcgtcagccaacggcaaccggtgacgttttccattgcggtcaacgac
tacggcctggaattgctcagcgccaccgagctggattggtcggcacacctgaacccgacg
ctgttgcgcaccgaccacttgctggacgacgtccttgccagcctgaacgccggcgaactg
gccttgcgccgcttccgagagatcgcccggatcgccgggctggtgttcgccggctatccc
ggcgcgccgaagagcactcggcaagtccaggcgtccagcggcttgttcttccaggtgttc
aagcaatacgacgccgacaacctgctgctggcccaggccggcgaggaagtcctgcgcgaa
gaactggatatacgccgattggagcagaccttggaacgcctcgataccttgaagctcgac
ctgcatgtcatcaagcgcccgaccccgctgggtttcccattgctggtggagcggttccgc
gaaagcatgagttcggaaaagctcgccgaccgcattcgccgaatggtcagcgaactggaa
agaaccgccgatcgggggaccgcctga

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