Pantoea ananatis LMG 20103: PANA_0087
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Entry
PANA_0087 CDS
T01195
Symbol
gyrB
Name
(GenBank) GyrB
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
pam
Pantoea ananatis LMG 20103
Brite
KEGG Orthology (KO) [BR:
pam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pam03032
]
PANA_0087 (gyrB)
03400 DNA repair and recombination proteins [BR:
pam03400
]
PANA_0087 (gyrB)
Enzymes [BR:
pam01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
PANA_0087 (gyrB)
DNA replication proteins [BR:
pam03032
]
Prokaryotic type
DNA Topoisomerases
PANA_0087 (gyrB)
DNA repair and recombination proteins [BR:
pam03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PANA_0087 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
GyrB_hook
HATPase_c
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
ADD75254
UniProt:
D4GGF3
LinkDB
All DBs
Position
complement(91377..93788)
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AA seq
803 aa
AA seq
DB search
MMSNSYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEALAGHCKDI
VVTIHADNSVSVQDDGRGIPTGIHEEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVG
VSVVNALSQKLELTIRREGKVHQQIYLHGVPEAPLAVTGDTDATGTRIRFWPSHDTFTNV
TDFEYDILAKRLRELSFLNSGVSIRLEDKRDARNDHFHYEGGIRAFVEYLNKNKTPIHPT
VFYFSTEKDGIGVEVALQWNDGFQENIYCFTNNIPQRDGGTHLAGFRAAMTRTLNAYMDK
EGYSKKAKVSATGDDAREGLIAVVSVKVPDPKFSSQTKDKLVSSEVKSAVEQQMNELLAE
YLLENPGDAKIVVGKIIDAARAREAARRAREMTRRKGALDLAGLPGKLADCQERDPALSE
IYLVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLASQEVATLITALGCGIG
RDEYNPDKLRYHSIIIMTDADVDGSHIRTLLLTFFYRQMPEIIERGHVYIAQPPLYKVKK
GKQEQYIKDDEAMLQYQIAIALDGTSLHTTASAPALGGEPLETLVAEFNSTQKMIKRMER
RYPMAMLRALIYHDTLSDISNEAQVTSWINGLVSYLTAREAHGSTYLAQVRENREQNVFE
PVLRVRTHGVDTDYPLDAEFLQGGEYRKICALGGKLRGLLEEDAYIERGERRQPVSSFEQ
AIDWLEKESRRGLSVQRYKGLGEMNPEQLWETTMDPDSRRMLRVTIKDAIAADQLFTTLM
GDAVEPRRAFIEENALKAANIDI
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
ttgatgtcgaattcttatgactcttcaagtatcaaagtcctgaaagggcttgatgcggta
cgcaaacgcccgggcatgtacatcggcgataccgatgacggaaccggtctgcatcacatg
gtattcgaggtcgtggataacgcaatcgacgaagcgctcgccggtcactgtaaagatatt
gtcgtgacaatccatgccgataattcggtttccgttcaggatgacggacgcggaattcct
accggtatccacgaagaagaaggtgtgtcggcggctgaagttatcatgaccgtgctgcac
gctggcggtaagtttgacgacaactcctataaagtgtctggcggcctgcacggcgtaggt
gtttccgttgtgaacgccctgtcccagaaactggaactgaccattcgtcgtgaaggcaaa
gtgcatcagcagatttatctgcacggcgtacctgaagcgccgctggcggttacgggagat
accgatgcaaccggtacccgcattcgtttctggccaagccatgacaccttcaccaacgtt
accgatttcgaatacgacattctggcgaaacgcctgcgcgaactgtccttcctgaactct
ggcgtatcgattcgtctggaagacaagcgtgatgcaagaaacgaccactttcactacgaa
ggtggtatccgcgcctttgttgagtacctgaataaaaacaaaacgcctattcacccaacc
gtattctatttctcaaccgagaaagacggcattggcgtggaagtcgcactgcagtggaat
gacggcttccaggagaacatctactgcttcacgaacaatattccacagcgcgacggcggt
acacaccttgcgggtttccgcgccgcgatgacgcgtacgctgaatgcctacatggataaa
gaaggctacagcaaaaaagccaaagtcagcgcgaccggtgacgatgcccgtgaaggtctg
attgcggtcgtgtcggtcaaagtgccggacccgaaattctcttcacagaccaaagacaaa
ctggtttcttcagaagtgaaatcggccgttgagcagcaaatgaatgaactgctggctgaa
tatctgctggaaaatccgggcgatgcaaaaatcgttgtgggcaaaattattgacgccgca
cgcgctcgtgaagccgcacgccgtgcccgtgagatgacccgccgtaaaggcgcgctggat
cttgctggcctgccaggcaaactggcggactgccaggagcgcgacccggcgctgtcagaa
atttacctggtggagggtgactctgcgggcggttctgccaagcaaggccgcaaccgtaag
aatcaggccattctgccgctgaaaggtaagatcctgaacgttgagaaggcgcgtttcgat
aagatgctggcttctcaggaagtcgccacgttgattaccgcgctgggctgtggcatcggc
cgcgatgaatacaatccggataaactgcgttaccacagcatcatcatcatgaccgatgcg
gacgtcgacggctcccacattcgtacactgctgttgaccttcttctatcgtcagatgcca
gaaattatcgagcgtggtcacgtgtatatcgcgcagccgccgctgtataaggtgaaaaaa
ggtaagcaggagcaatacatcaaggatgacgaggccatgctgcagtaccagattgctatc
gcccttgacggtacctcgctgcataccaccgccagcgcacccgcgctaggcggcgaaccg
ctggaaacactggtcgctgaattcaacagcactcagaagatgatcaaacgcatggagcgt
cgttatccgatggccatgctgcgtgcgctgatttatcacgacacactgagcgatatcagc
aacgaagcgcaggtgaccagttggatcaacggtctggttagctacctgacagcacgcgag
gcgcacggcagtacctatctggcccaggtgcgtgagaaccgtgagcagaatgtctttgag
ccggttttacgcgttcgtacacatggagtggacacggattatcctctggatgccgagttc
ctgcagggtggcgaataccgcaagatctgtgcactgggcggcaagcttcgcggcctgctt
gaggaagatgcctatatcgaacgtggcgaacgtcgtcagcctgtcagcagttttgaacag
gcgattgactggctggagaaagagtcgcgtcgcggtctgtcagtgcagcgatataaaggt
ctgggcgaaatgaacccagagcagctgtgggaaaccaccatggatccggacagccgccgt
atgttacgcgtgaccatcaaagatgcgattgccgccgatcagctgttcaccacgttgatg
ggtgacgcggttgaaccgcgccgcgcgttcattgaagagaatgcgctgaaagccgcaaat
attgatatctaa
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