Pantoea ananatis LMG 20103: PANA_1988
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Entry
PANA_1988 CDS
T01195
Symbol
ydcJ
Name
(GenBank) YdcJ
KO
K25986
2-oxoadipate dioxygenase/decarboxylase [EC:
1.13.11.93
]
Organism
pam
Pantoea ananatis LMG 20103
Pathway
pam00310
Lysine degradation
pam01100
Metabolic pathways
pam01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
pam00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
PANA_1988 (ydcJ)
Enzymes [BR:
pam01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.93 2-oxoadipate dioxygenase/decarboxylase
PANA_1988 (ydcJ)
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Motif
Pfam:
DUF1338
DUF1338_N
Motif
Other DBs
NCBI-ProteinID:
ADD77155
UniProt:
D4GF33
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All DBs
Position
complement(2224084..2225433)
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AA seq
449 aa
AA seq
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MVIMDNVISADAIRTGFSKAMSDMYQQEVPLYGTLMQLVKDVNQASLAADSALQQRLAQA
DELSRLSLERHGAIRVGSAEELAMLRQMFAVMGMFPVGYYDLSQAGVPVHSTAFRPVDDD
ALRRNPFRIFTSLLRLELIEDPALRDEAAAILASRDIFTAGCRALIQQHQQQGGLTETQA
QRFITEALETFRWHSHSLVESHTYQALNQQHRLIADVVCFPACHINHLTPRTLDIDRVQA
LMPERGIDPKNVIEGPPRRKVPILLRQTSFKALEEPVVFKDGYQGTHTARFGEIEQRGAA
LTPEGRALYDRLLTEAGSGADNQQHQQRLSAVFQAFPDNETDLRREALAWFHYRLSDKGR
AEPPQPGEPLDALIEQGRILADPIIYEDFLPVSAAGIFQSNLGDHTQARSSGQASRSSFE
AALGCAVLDEMALYAQRQEASLQRCGLAC
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
gtggtgattatggataacgttatcagtgcggatgccatccgtacgggcttttcaaaggca
atgtcggacatgtatcagcaggaagtgccgctgtacggcacgttgatgcagttggtcaaa
gacgttaatcaggcctcgctggcggcggacagcgccctgcagcagcgcctggcgcaagcc
gatgagctgagccgtttaagcctggaacgccacggtgcaatccgcgtcggcagcgccgaa
gagctggccatgctgcgtcagatgttcgccgttatgggcatgttcccggtcggctattat
gacctttctcaggcgggcgtaccggtacactcaaccgcgtttcgccctgttgacgacgac
gcgttgcgtcgtaatccgttccgtatttttacctcattactgcggcttgaattgattgaa
gacccggcgctgcgcgatgaagctgccgcaatcctggcctcgcgggacattttcaccgca
ggctgtcgcgcattaattcaacagcatcaacagcagggcggtctgactgagacgcaggcg
cagcgctttattaccgaggcgttagaaacctttcgctggcactcgcatagccttgttgaa
agccacacctatcaggcccttaatcaacaacaccggctgattgcggacgtcgtgtgtttt
cctgcctgtcatatcaaccacctgacaccgagaaccctggacattgatcgcgttcaggcc
ttaatgcccgaacgtggtatcgatcccaaaaacgttattgaaggcccgcctcggcgcaag
gtgccgattttattacgccagaccagttttaaagcgctggaggaacctgtcgttttcaaa
gatggctatcagggcacccatacggcaagatttggtgagatagaacagcgcggcgcagcc
ttaaccccagaggggcgcgcgctttacgatcggctgctgactgaggccggaagcggcgct
gacaatcaacagcatcagcaacggttgtctgctgtatttcaggcttttccggataacgaa
accgatctacgccgggaggctctggcctggtttcattatcgcctgagtgataaaggccgg
gctgaaccgcctcagcccggtgaaccgctggacgccctgatcgaacagggccgcattctg
gccgatcccattatttatgaggattttctaccggtcagtgcggcggggatttttcagtcc
aacctcggggatcacacccaggcgcgctcgtcaggccaggcaagccgcagcagctttgaa
gccgcactgggctgcgcagtactggacgaaatggcgctgtatgcccagcgtcaggaagcc
tcattacaacgttgcggcctggcatgctaa
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