Pseudomonas amygdali: BKM19_019970
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Entry
BKM19_019970 CDS
T05354
Name
(GenBank) autotransporter outer membrane beta-barrel domain-containing protein
Organism
pamg
Pseudomonas amygdali
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Gene cluster
GFIT
Motif
Pfam:
Autotransporter
Pertactin
Beta_helix
TbpB_B_D
Motif
Other DBs
NCBI-ProteinID:
AVB15595
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All DBs
Position
complement(4089890..4091755)
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AA seq
621 aa
AA seq
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MGSINPGSTVSAHSSDVSGSGYGISVGLWGALSIFNTDVRGFASQSKSGQGIFVSGANML
IADNSHVTGDMNGIHLVDGSQAGILVGNKSVAVIDRSIVQGLAGAAIKVNQRAALDIEAD
IAVQNHSELWAGNGNLLEVEDHSTVNFNVDNSTLYGDLVADDTSTLNITLQNDAQLNGNI
VNGNRLAITSGSHWQMQGDNAVKSLSLHGGRVSFAGEGFHTLSLNELSGGGTFGLRVDLD
NGVGDLIDVNGPASGQFGLRVRNTGVEVVSADMAPLKVVHTEGGDAQFSLLGGRVDLGAY
SYLLEQQGNDWFIVGKDKVISPSTQSALALYSAAPAIWMSELSTLRSRMGEVRASGRAGG
WMRAYGNRLNATTSDGVGYRQKQSGLSLGADAPVEVSSGQLVLGVLGGYSTSGIDLSRGT
TGKVDSYYAGAYATWLSDDGYYVDGVLKLNRFRNKADVAMSDASKAKGDYTNNGVGGWVE
FGRHIKLADDYFLEPFAQLSSVVVQGQELRLDNGMKAKNDQTQSVLGKVGTSLGRSVALK
DGGVLQPYVRVAIAQEFSRHNEVKANDVKFDNSLFGSRGELGAGVSVSLSERLKLHADFD
YMKGRHIEQPWGANVGLRLAF
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgggctctatcaaccctggctccacggtatcggctcattcaagcgatgtatcgggatcg
ggctacggtatttcagtcgggttgtggggggcgctgagtattttcaataccgatgtgcgc
gggtttgcgtcgcaaagcaaaagtggccaggggatttttgtttctggcgccaatatgctg
atcgccgacaacagtcatgtgacaggcgacatgaatggaatccatctggtagatggatcc
caagccggaatactggtcggaaacaagtccgttgctgtgattgaccgatcgatagtccag
ggtttggccggggccgccatcaaagtaaaccagcgcgctgcgctcgacatcgaggccgac
attgctgtgcaaaaccattccgagctatgggccggaaatggcaacctgctggaggtggaa
gatcacagcactgtcaacttcaacgtcgacaacagcaccctctacggcgaccttgtcgcc
gatgacaccagcaccctgaacatcacgctgcaaaacgacgcgcaattgaacggcaacatc
gtcaatggcaaccgtctggcgattacctcgggcagtcactggcagatgcagggcgacaat
gccgtcaagtcgctttccctgcacggggggagggtttcgtttgctggtgaagggttccat
acactttcgctgaatgagttgtcagggggcggcacgtttggcttgcgcgtggatctggac
aacggtgtcggagatcttatagacgtcaacggcccggccagtgggcagttcgggttgcgg
gtgcgcaacacgggggtggaggttgtctctgctgacatggcaccgctcaaggtggtgcat
accgaaggtggtgacgcgcaattcagcctgctgggcgggcgtgtcgacctcggcgcctat
tcgtatctgctggagcaacagggcaatgactggttcatcgtcggtaaagacaaggtcata
agcccctcgacccagagcgcacttgcgctttacagcgcggcacctgccatctggatgagt
gagctctctaccctgcgttcgcgcatgggcgaggttcgcgcaagcggcagggcgggcggc
tggatgcgtgcctatggcaacaggcttaatgccacgaccagtgatggtgtcggctaccgg
cagaagcaaagtggcctgtcgctgggtgccgatgcgcctgtcgaggtcagcagcggccaa
ttggtgttgggtgtgctgggagggtacagcacgtccggtatcgatttgagccgtggtact
acgggaaaagtcgacagctactatgcaggtgcctatgccacctggctgtcggacgacggc
tactacgttgacggggtgctcaagctcaaccgctttcgcaacaaggcagatgttgccatg
agcgatgcaagcaaggccaagggtgactacaccaacaacggggtagggggctgggtagag
ttcggccgccacatcaagctggcggacgattacttccttgagcccttcgctcagctgtcc
agcgttgtcgttcaggggcaggagctgcgcctggacaacggcatgaaagcgaagaacgat
cagacccagtcggtattgggcaaggttggcacctcgctcggccgcagtgttgcgctcaag
gatggcggagtgttgcagccttatgtgcgtgtcgccattgcgcaggagttttcgcgccat
aacgaggtgaaagccaacgatgttaaatttgataacagcctgttcggttctcgcggcgaa
ctgggcgccggggtatcggtgtcgctgtccgagcgtctgaaactgcatgcagacttcgat
tacatgaaaggtcggcatatcgagcaaccctggggtgcgaatgtggggctacgcctggca
ttctga
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