Pseudomonas amygdali: BKM19_026315
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Entry
BKM19_026315 CDS
T05354
Name
(GenBank) single-stranded DNA-binding protein
KO
K03111
single-strand DNA-binding protein
Organism
pamg
Pseudomonas amygdali
Pathway
pamg03030
DNA replication
pamg03430
Mismatch repair
pamg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pamg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BKM19_026315
03430 Mismatch repair
BKM19_026315
03440 Homologous recombination
BKM19_026315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pamg03032
]
BKM19_026315
03400 DNA repair and recombination proteins [BR:
pamg03400
]
BKM19_026315
03029 Mitochondrial biogenesis [BR:
pamg03029
]
BKM19_026315
DNA replication proteins [BR:
pamg03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
BKM19_026315
DNA repair and recombination proteins [BR:
pamg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
BKM19_026315
TLS (translesion DNA synthesis) factors
Other SOS response factors
BKM19_026315
Mitochondrial biogenesis [BR:
pamg03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Other Mitochondrial DNA replication factors
BKM19_026315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSB
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AVB16689
LinkDB
All DBs
Position
complement(5399526..5400089)
Genome browser
AA seq
187 aa
AA seq
DB search
MARGVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQSGQKVEKTEWHRVSMF
GKVAEIAGEYLRKGSQVYIEGKLQTREWEKDGIKRYTTEIVVDMQGTMQLLGGRPQGDSQ
QGQGGGNYNQSAPRPQQSRPQQSAPQQSAPQQNYNQQPPQRDSRPAPQQQAPQPAADFDS
FDDDIPF
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atggcccgtggggttaacaaagtcatattggtcggtacatgcggccaggatcccgaagtt
cgctacttgcctaacggtaacgccgtgaccaacctgagtctggcaaccagcgaacaatgg
actgacaaacagagcggtcagaaagtcgaaaagaccgagtggcaccgtgtatcgatgttc
ggcaaggtcgccgaaatcgctggcgaatacctgcgcaagggttcgcaggtgtacatcgaa
ggcaagctgcagacccgcgaatgggaaaaagacggcatcaagcgttacaccactgaaatc
gtcgtcgacatgcagggcaccatgcaactgctgggcggccgtccacaaggcgactcccaa
caaggtcagggcggcggcaactacaaccagtccgcaccgcgtccacagcagtcgcgccct
cagcaatcggcgccgcagcagtctgcacctcagcagaactacaaccagcagccgccacag
cgcgactcgcgcccggcgccgcaacaacaagcgccgcagccagctgctgactttgatagc
tttgatgatgatattccgttctga
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