Profundibacter amoris: BAR1_04990
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Entry
BAR1_04990 CDS
T06831
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
pamo
Profundibacter amoris
Brite
KEGG Orthology (KO) [BR:
pamo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pamo03021
]
BAR1_04990 (rpoH)
Transcription machinery [BR:
pamo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BAR1_04990 (rpoH)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_11
Motif
Other DBs
NCBI-ProteinID:
AXX97342
UniProt:
A0A347UER4
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All DBs
Position
complement(1000597..1001493)
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AA seq
298 aa
AA seq
DB search
MGNYTNLPAPTPEGGLNRYLQEIRKFPMLEPEEEYMLAKRWAETEDSEAAHRLVTSHLRL
AAKIAMGYRGYGLPTAEVISEANVGLMQAVKRFDPEKGFRLATYAMWWIRASIQEYVLRS
WSLVKLGTTSAQKKLFFNLRKAKARIGALEEGDMHPDNVKRIANDLGVTEKEVISMNQRM
AGSDASLNAVVGSEGEGTMQWQDWLEDENADQAGDYEKKDELDVRRELLVQAMDVLNDRE
KDILEQRRLRDKPVTLEELSGQYDVSRERIRQIEVRAFEKIQKRMRELAKEKGLLEPA
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
ttgggcaattatacaaatcttcccgcgccgacccctgaaggggggttgaaccgctatttg
caggaaatccgcaaattcccgatgctggagccggaagaggaatatatgctggccaaacgc
tgggccgaaaccgaggattcggaggcggcgcacaggctggtgacgtcgcacctgcggctg
gcggcgaaaatcgccatgggctatcgcggctatggcctgcccacagccgaggtaatttcc
gaagccaacgtcggtttgatgcaggcggtgaaacgctttgatccggaaaaaggcttccgt
ctggcgacctatgcgatgtggtggatccgcgccagcatccaggaatatgtgctgcggtcg
tggtctctggtgaaactcggcaccaccagcgcgcagaaaaagctgttcttcaatctgcgc
aaggccaaagcgcgtattggcgcgctggaagaaggggatatgcaccccgataacgtcaaa
cgcattgcaaatgatctgggggtcaccgaaaaagaggtgatctcgatgaaccagcggatg
gcgggttcggacgcctcgctgaatgcggtggtcgggtccgagggcgaaggcaccatgcaa
tggcaggactggctggaagatgaaaacgccgatcaggccggcgattacgagaagaaagac
gagctggacgtgcgccgcgaattgctggtgcaggcgatggatgttctgaatgatcgtgaa
aaggacattttggagcaacgccgcttgcgcgacaaaccggtgacgctggaagagctgtca
ggccagtatgatgtatcgcgcgaacgtatccgccaaatcgaagtgcgggcgttcgagaaa
atccagaaacggatgcgcgaactagccaaggaaaagggcctgctggaaccggcataa
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