Pseudomonas anuradhapurensis: HU763_002445
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Entry
HU763_002445 CDS
T07691
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
KO
K11900
type VI secretion system protein ImpC
Organism
panh
Pseudomonas anuradhapurensis
Pathway
panh02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
panh00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
HU763_002445 (tssC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
panh02044
]
HU763_002445 (tssC)
Secretion system [BR:
panh02044
]
Type VI secretion system
Imp/Vas secretion system core components
HU763_002445 (tssC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VipB
VipB_2
Motif
Other DBs
NCBI-ProteinID:
QXI48351
LinkDB
All DBs
Position
532276..533748
Genome browser
AA seq
490 aa
AA seq
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MSTAAQQQSAENSEFSILDSIIAETRLTPDDEAYDIAKRGVSAFIEELLKPQNDGEPVKK
ALVDRMIAEIDAKLSRQMDEILHHPDFQAMESAWRGLQLLVDRTNFRENIKIEILNVSKQ
DLLDDFEDSPEVMQAGLYKHIYTAEYGQFGGQPVGAVIANYYLSPSSPDVKLMQYVSSVA
CMAHAPFIAAAGPKFFGLESFTGLPDLKDLKDHFEGPQFTKWQSFRESEDARYIGLTVPR
FLLRNPYDPEENPVKSFVYKETVANSHEHYLWGNTAYAFGTKLTDSFAKFRWCPNIIGPQ
SGGAVEDLPLHHFESMGEIETKIPTEVLVSDRREYELAEEGFIALTMRKGSDNAAFFSAN
SAQKPKFFGISAEGKTAELNYKLGTQLPYMMIVNRLAHYIKVLQREQLGSWKERTDLELE
LNKWIRQYVADQENPSAEVRGRRPLRAAQVIVSDVEGEPGWYRVSLNVRPHFKYMGADFT
LSLVGKLDKE
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccgccgcacaacaacagagcgccgagaacagcgaattcagcattctcgacagt
atcattgccgaaacccgcctgacgccggacgacgaagcctacgacattgccaagcgcggc
gtgtcggccttcatcgaagagttgctcaagccgcagaacgacggggagccggtcaagaag
gcgctggtcgatcgcatgatcgccgagatcgacgccaagctcagccgccagatggacgag
atcctccaccacccggacttccaagccatggaatcggcctggcgaggcctgcagctgctg
gtcgatcgcaccaacttccgcgagaacatcaagatcgagattctcaacgtctccaagcag
gacctgctggacgacttcgaagactcgccggaagtgatgcaggccggcctgtacaagcac
atctacaccgccgagtacggccagttcggtggccagccggtcggcgcagtcattgccaac
tactacctgtcgccgagctcgccggacgtcaagctgatgcagtacgtctccagcgtcgcc
tgcatggcccacgcaccgttcattgcggccgccggcccgaaattcttcggcctggaaagc
ttcactggcctgccggacctcaaggacctgaaggatcacttcgaagggccacagttcacc
aagtggcagagcttccgtgagtccgaagatgcccgctatatcggcctgaccgtaccgcgc
ttcctgctgcgcaacccgtacgatccggaagaaaacccggtcaagtcgttcgtctacaag
gaaaccgtggccaacagtcacgagcactacctgtggggcaacaccgcatacgccttcggt
accaaactgaccgacagcttcgccaagttccgctggtgcccgaacatcatcggcccacag
agcggcggcgcagtggaagacctgccgctgcaccacttcgagagcatgggcgagatcgag
accaagatcccgaccgaagtgctggtgtctgaccgtcgcgaatacgagctggccgaagag
ggcttcatcgccctgaccatgcgcaagggcagcgacaacgcggcgttcttctcggccaac
tcggcacagaagccgaagttcttcggcatcagtgccgaaggcaagaccgccgagctgaac
tacaagctgggcacccagctgccgtacatgatgatcgtcaaccgcctggcccactacatc
aaggtcctgcagcgcgagcagctgggctcctggaaggaacgcaccgacctggagctggag
ctgaacaagtggatccgccagtacgtggccgaccaggagaacccgagcgccgaagtgcgt
ggccgtcgccccctgcgcgccgcccaggtgatcgtcagcgatgtggaaggtgagccgggc
tggtaccgcgtcagcctgaacgtgcgtccgcacttcaagtacatgggcgccgatttcacc
ctgtcgctggtcggcaagctggacaaggagtaa
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