Pantoea anthophila: OJ965_14315
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Entry
OJ965_14315 CDS
T08866
Symbol
sdiA
Name
(GenBank) transcriptional regulator SdiA
KO
K07782
LuxR family transcriptional regulator, quorum-sensing system regulator SdiA
Organism
pano
Pantoea anthophila
Pathway
pano02020
Two-component system
pano02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pano00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
OJ965_14315 (sdiA)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
OJ965_14315 (sdiA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pano03000
]
OJ965_14315 (sdiA)
Transcription factors [BR:
pano03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
OJ965_14315 (sdiA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autoind_bind
GerE
HTH_23
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
UZH01879
LinkDB
All DBs
Position
complement(2532049..2532771)
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AA seq
240 aa
AA seq
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MGSENYFAWRSSVKEQFQALTTSSELKALLQHFTESLGFDYFAFLIQHPVPFTRPRIHLY
STYPTLWVKRYEKQNYYAVDPVLSLCQRPGRGMAWTEAQFADAGNLWRESREYGLQSGFS
CSAMAPNRVIGILSISSQQPISVQLCHAELEVKLHLLAELSLDTLERFSDDAMMVLKNAL
SQRELEILKWTAEGKTAVEISLILSISEHTVNFHQKNMQKRFNVSNKTQIACYAAAIGLI
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgggtagtgaaaattatttcgcctggcgaagcagtgtgaaagaacaatttcaggcatta
acgacctcatctgaattgaaggcgttattgcaacattttacggaatcattaggcttcgat
tattttgcttttttgattcagcacccggtgccatttacccgaccgcgcattcatttatac
agcacctatcccacattatgggttaagcgctatgagaagcagaattattacgcggtagac
ccggtgctcagcttgtgtcagcgaccagggagggggatggcatggacggaggcgcagttt
gctgacgcaggcaacctgtggcgggagtcgcgggaatatgggcttcagagcggtttttct
tgctctgcaatggcaccaaatcgcgtcattggtatattatctatatcgtcccaacagccc
atttctgtccagctctgccatgctgagctggaggtgaaactccaccttttagcggaacta
agcctggatacgctggaacgctttagcgatgatgcgatgatggtactgaaaaatgcgtta
agtcagcgcgagctggaaattctgaaatggacagccgaaggaaaaacggcggtcgagatt
tcacttattttatccatctctgaacataccgttaactttcatcaaaaaaatatgcaaaag
cgtttcaatgtttccaataaaacgcagattgcctgttatgcagccgcaatcggactgatt
tga
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integrated database retrieval system
