Pantoea sp. PSNIH2: PSNIH2_07640
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Entry
PSNIH2_07640 CDS
T03514
Name
(GenBank) RNase II stability modulator
KO
K14051
c-di-GMP phosphodiesterase Gmr [EC:
3.1.4.52
]
Organism
panp
Pantoea sp. PSNIH2
Pathway
panp02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
panp00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PSNIH2_07640
Enzymes [BR:
panp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
PSNIH2_07640
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Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_9
PAS
PAS_4
PAS_10
Flg_hook
GGDEF_2
Motif
Other DBs
NCBI-ProteinID:
AIX73667
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All DBs
Position
complement(1650270..1652255)
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AA seq
661 aa
AA seq
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MLEDQGQTLLFTLFGTRSPYWHLTSDSDALRLSREELAETNLAVPLSSSQAQLLRAMTVV
TSSVNLVINLRGEELPMHFVGRKINQDEWAGTASAWGDTSSVARDLTQGLSFAEQVVSEA
NSVIVILDQHGNIQRFNRLSEEYTGLKEQEVIGRNVFKLFMTKQEALASRRNITGFFRDG
SSYEVERWVKTRKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRVLANTD
TVTGLPNRNAIHQRMTEVLEKREDRQVGVVYMDLDNFKKVNDAYGHMFGDQLLQAVSLAV
LSCLEPEQTLGRLGGDEFIVLAEKTTQEALEALAVRILARLRQPFRIGLIEVYTGCSVGI
ALAPHHGEDRESLIRNADTAMYHAKENGRGQACVFSPEMNQRVFEYLWLDTNLRKALEHQ
QLIIHYQPKISEGGKVVGAEALVRWLSPERGMIPPNEFISYAEESGLIVPLGRWVMLTAL
QQIIAWRRQGIHLRVAVNVSARQLLDQSIYNDLKEALQQNGISVSPIDIELTESCLIENE
QQALRLMNQFRELGAEVHLDDFGTGYSSLSQLARAPIDAIKLDQSFVRSVNERPVSQSLV
HAIVAVAKALHLRVIAEGVETELEEQFLLENGVDERQGYYYGKPMPADQLEHWLAQRPAK
P
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgcttgaagatcagggacaaacgttgctctttacgctgtttggcacccgcagcccctac
tggcaccttacatccgacagcgatgcactccggctgtcacgcgaagagctggcggaaacg
aatctcgccgtgccgctctcttcctctcaggcgcagctgctgcgcgctatgacggtggtg
acctccagcgttaacctggtgattaatttacgcggcgaagaactgccgatgcattttgtc
ggccgcaagatcaatcaggatgaatgggccggcaccgcctccgcctggggtgacacctca
tccgtggcgcgggatctaacccaggggctttcttttgccgaacaggtggtttcagaagcc
aattcggtcatcgttattctcgatcagcacggcaacattcagcgtttcaatcgcctcagc
gaagaatataccggcctgaaagagcaggaagtgattggccgcaacgtgtttaagctcttt
atgaccaagcaggaagcgctggcgtcgcgccgcaatatcaccggctttttccgtgacggc
agctcttatgaggtggagcgctgggtcaaaacgcgcaaaggtcagcgcctgtttctgttc
cgcaataaattcgtccacagcggcagcggcaaaaatgaaatctttctgatctgttccggc
accgatattactgaagaacgccgggcgcaggagcgactgcgcgtgctggccaataccgat
accgtgaccggtctgccgaaccgcaacgccattcatcagcgcatgaccgaagtgctggaa
aagcgtgaagatcggcaggtcggcgtggtctatatggatcttgataactttaaaaaggtc
aacgacgcctacgggcatatgttcggcgatcagctgttgcaggcggtttcgctggcggtg
ctctcctgcctggagccggaacagacgctgggacgactcggcggcgacgaatttatcgtg
ctggcggaaaaaaccacccaggaagcgctggaggcgttggccgtgcgcatcctggcgcgt
ctgcgtcagcctttccgcatcggtctgatcgaagtttataccggctgttcagtgggcatc
gcgctggcgccgcaccatggcgaagatcgcgaaagtctgattcgcaacgccgatacggcg
atgtatcacgccaaagagaacggccgcggtcaggcttgcgtcttttcgccggaaatgaac
cagcgggtctttgaatatctctggctcgataccaacctgcgcaaagcgctggagcaccaa
cagctgataatccattatcagcctaaaatcagcgaaggcggcaaagtggtcggcgccgag
gcgctggtgcgctggctttcgccagaacgcggcatgatcccgcctaacgaatttatctcc
tatgccgaagagtccggtctgattgtgccgctcggacgctgggtgatgctgacggcgtta
cagcagattatcgcatggcggcgccagggcattcacctgcgcgtcgcggtgaacgtctcc
gcacggcagctgctcgatcaaagcatctataacgatttaaaagaggcgctgcaacagaac
ggcatcagcgtcagccctattgatatcgagctgaccgaaagctgtttgattgaaaatgag
cagcaggcgctgcgtctgatgaatcagttccgtgagttgggcgccgaagtgcatcttgat
gatttcggtactggctattcgtcgctgtcacagctggcgcgcgcgccgattgacgccatt
aagctcgatcagagttttgtccgcagcgttaatgaacgtccggtttcacagtcgctggta
catgcgatcgtggcggtagcgaaggcgctgcatctgcgcgtgattgccgaaggcgtggaa
acggagctggaggagcagtttctgctggagaacggcgtagatgagcggcagggttactat
tacgggaagccaatgcccgcagaccaactggagcattggcttgctcagcgtcctgccaag
ccttaa
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