Pantoea sp. PSNIH2: PSNIH2_16310
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Entry
PSNIH2_16310 CDS
T03514
Symbol
fadB
Name
(GenBank) multifunctional fatty acid oxidation complex subunit alpha
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
panp
Pantoea sp. PSNIH2
Pathway
panp00071
Fatty acid degradation
panp00280
Valine, leucine and isoleucine degradation
panp00310
Lysine degradation
panp00362
Benzoate degradation
panp00380
Tryptophan metabolism
panp00410
beta-Alanine metabolism
panp00640
Propanoate metabolism
panp00650
Butanoate metabolism
panp00907
Pinene, camphor and geraniol degradation
panp00930
Caprolactam degradation
panp01100
Metabolic pathways
panp01110
Biosynthesis of secondary metabolites
panp01120
Microbial metabolism in diverse environments
panp01200
Carbon metabolism
panp01212
Fatty acid metabolism
Module
panp_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
panp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
PSNIH2_16310 (fadB)
00650 Butanoate metabolism
PSNIH2_16310 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
PSNIH2_16310 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
PSNIH2_16310 (fadB)
00310 Lysine degradation
PSNIH2_16310 (fadB)
00380 Tryptophan metabolism
PSNIH2_16310 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
PSNIH2_16310 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
PSNIH2_16310 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
PSNIH2_16310 (fadB)
00930 Caprolactam degradation
PSNIH2_16310 (fadB)
Enzymes [BR:
panp01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
PSNIH2_16310 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
PSNIH2_16310 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
PSNIH2_16310 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
PSNIH2_16310 (fadB)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Pilosulin
Motif
Other DBs
NCBI-ProteinID:
AIX75177
LinkDB
All DBs
Position
3521216..3523402
Genome browser
AA seq
728 aa
AA seq
DB search
MLYQGDTLSLDWLDDGIAELVFDAPGSVNKLDTQTVASLGEAIAVLEKQTALKGVLLSSA
KPAFIVGADITEFLSLFNAPSEKLANWLAFANGIFNRLEDLPVPTLSAIKGYALGGGCEC
VLATDYRIATPDARIGLPETKLGIMPGFGGSVRLPRLLGADSALEIIAAGKDVDAKSALA
LGLVDAVVPEEKLRAGAIAMLKMAIADADDWRQRRQPKLQPLKLSPIEAAMSFTIAKSMV
QQSAGKHYPAPMRAVKTIEAAASLGRDEALKLETQAFVPLAQSKEARALVGIFLNDQYVK
GNAKKLTQGHAPPQQAAVIGAGIMGGGIAWQSAWKGVPVIMKDISEKSLALGMNEAGKLL
NKQLERGKIDGQQLANIISTIHPTLSFDGFDRADIVVEAVVENPQVKAKVLADTEAQVRE
ETILATNTSTIPVSLLARSLKRPENFCGMHFFNPVPRMPLVEVIRGEKTSDATLAKVIAW
AAKMGKTAIVVNDCPGFFVNRVLFPYFAGFSLLLRDGADFRQIDKVMEKQFGWPMGPATL
LDVVGIDTAHHAQSVMADGFPTRMKKDYRDAIDVLFDAQRFGQKNQRGFYAWEKDSKGKT
KKTADSETDALLQSVSAPRRVFTDDEIIARMMIPMINEVVRCLEERVIASPAEADMALVY
GLGFPPFHGGVFRYLDTLSNAAFVTLAQRYEELGPLYAIPELLAMKAQQNESWYPPAEPI
TDIALATA
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgctttaccaaggcgacacactttcccttgactggctggacgacggcatcgccgagctg
gtattcgacgcgcccggttcagtaaacaaactggatacgcaaacggtagccagcctgggc
gaagccattgccgtgctggaaaaacagacggcgctgaaaggcgttctgctcagctctgct
aaaccggcgtttatcgttggcgcggatatcaccgaatttttatcattgtttaacgcgcca
tcagagaagctggcgaactggctggctttcgccaacggcatctttaaccgcctggaggat
ctgccggttcctaccctttccgcgatcaaaggctacgcgctgggcggcggctgcgaatgc
gttctcgccaccgattatcgtatcgccacgccggatgcgcgcattggcttgccggaaacc
aaactgggcattatgccgggctttggcggttcggtgcgtctgccccgactgctgggcgcc
gacagcgcgctggaaattatcgccgccgggaaagacgttgacgccaaaagcgcgctggcg
ctcggcctggtagacgcggtggtgccggaagaaaaactgcgcgctggcgcgatcgccatg
ctgaaaatggcgatcgccgatgccgacgactggcggcaacgacgtcaaccgaagctgcag
ccgctgaagctcagccccattgaagcggcaatgagcttcaccatcgccaaaagcatggtg
cagcagagcgccggcaaacattatcctgcgccgatgcgggcggtaaaaaccattgaggcc
gcagccagcctgggacgtgatgaggcgctgaagctggaaacgcaggcgttcgtgccgctg
gcgcagtcgaaagaggcgcgcgccctggtcggcatcttcctgaacgatcagtatgttaaa
ggcaatgcgaaaaagttgacgcagggccacgccccgccgcagcaggcggcggtaataggc
gctggcattatgggcggcggcatcgcctggcagtcggcatggaaaggcgtgccggtcatt
atgaaagatatcagcgaaaaatcgctggcgctggggatgaacgaagcgggcaagctgctg
aataaacagctggagcgcggcaaaatagacggacaacagctggccaatattatctccact
atccaccctacgctctctttcgacggttttgaccgcgcagatatcgtggtggaagccgta
gtggaaaacccgcaggttaaagcgaaagtgttggcggacaccgaggcgcaggtgcgcgag
gagaccatcctggccaccaatacctcaaccatcccggtgagcctgctggcacgatcgctg
aaacgtcctgaaaatttctgcggcatgcacttctttaatcccgtgccccgtatgccgttg
gtagaagtgatccgtggtgagaaaacctcagacgccacgctggcgaaggtgatcgcctgg
gcggccaaaatgggcaagaccgccatcgtcgtcaatgactgccccggctttttcgttaac
cgcgtgctctttccctacttcgccggcttcagcctgctgctgcgcgacggcgccgatttc
cgccagattgataaagtgatggaaaagcagttcggctggccaatgggacccgccacgctg
ctggatgtggtgggcatcgataccgcgcatcatgcgcaaagcgttatggcggacggcttc
ccgacgcgcatgaagaaagattaccgcgacgccattgatgtgctgttcgacgcgcaacgc
ttcggacaaaaaaaccagcgcggcttttacgcctgggagaaagacagcaaaggcaaaacg
aagaaaaccgccgatagcgagaccgatgcgctgctgcaaagcgtgagcgcgccccgtcgc
gtgtttaccgacgatgagattatcgcccgcatgatgatcccgatgattaacgaagtcgtg
cgctgccttgaggagcgcgttatcgccagcccggcggaagccgatatggcgctggtttac
gggctcggctttccgccgttccacggcggcgtattccgctatctcgatacgttaagcaac
gcggccttcgtaacgctggcacagcgctacgaagagctcggcccgctctacgccattcct
gaactgctggcgatgaaggcgcagcaaaatgagagctggtatccgcccgccgaaccgatc
accgacatcgcgctggccacggcgtga
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