Pseudomonas antarctica: A7J50_5811
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Entry
A7J50_5811 CDS
T04830
Name
(GenBank) DNA-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
panr
Pseudomonas antarctica
Pathway
panr03420
Nucleotide excision repair
panr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
panr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
A7J50_5811
03430 Mismatch repair
A7J50_5811
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
panr03400
]
A7J50_5811
Enzymes [BR:
panr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A7J50_5811
DNA repair and recombination proteins [BR:
panr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
A7J50_5811
MMR (mismatch excision repair)
Other MMR factors
A7J50_5811
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
AAA_11
AAA_22
DUF1175
Motif
Other DBs
NCBI-ProteinID:
ANF89140
UniProt:
A0A172Z9F2
LinkDB
All DBs
Position
6373336..6375519
Genome browser
AA seq
727 aa
AA seq
DB search
MRDDLSLLLNSLNDAQRQAVAAPVGRQLVLAGAGSGKTRVLVHRIAWLIQVENASPHSIL
SVTFTNKAAAEMRHRIEQLMGISPAGMWVGTFHGLAHRLLRAHWQEAGLSQTFQILDSDD
QQRLVKRVIRELGLDEQRWPARQAQWFINGQKDEGLRPQHIQASGDLFLATMRSIYEAYE
AACVRAGVIDFSELLLRALDLWRDNPGLLAHYQKRFRHILVDEFQDTNAVQYAWLRLLAK
GGDSLMVVGDDDQSIYGWRGAKIENIYQYSDDFPDAITIRLEQNYRSTAGILKAANALIA
NNTGRMGKELWTDGGEGEAINLYAAFNEHDEARYVVETIESALKTGLARSDIAILYRSNA
QSRVLEEALLRERIPYRIYGGQRFFERAEIKNAMAYLRLLEGRGNDAALERVINIPARGI
GEKTVEAIRDHARHADVSMWEAMRLLIANKGLTGRAAGALGVFVELIENLAAKCAEMPLH
LMTQTVIEQSGLIAYHEAEKGEKGQARVENLEELVSAARAFENTEEDEELTPLAAFLGHA
SLEAGDTQADEHEDSIQLMTLHSAKGLEFPYVFLVGMEEGLFPHKMSLEEPGRLEEERRL
AYVGITRAMQNLVMTYAETRRLYGSETYNKVSRFVREVPKGLIQEVRLSNSVSRPFGGGQ
QQNSSNLFAGSEIPETPFSLGQQVKHAIFGEGVILNFEGAGAQARVQVNFAEGSKWLMMG
YAKLEAI
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgatgatctctctcttttgctgaactccctcaacgatgcccaacgccaggccgta
gcagcccccgttggccgtcagttggtcctggccggtgctggctccggtaaaacccgagtg
ctggtgcaccgtatcgcctggttgatccaggtcgaaaacgcgtccccgcattcgatcctg
tcggtaaccttcaccaacaaggccgctgccgaaatgcgtcaccgcatcgagcagttgatg
ggcatcagccccgctggcatgtgggtgggcacgttccacggcctggcacaccgcctgttg
cgagcgcactggcaggaagcgggcttgagccagacgttccagatcctcgacagcgacgac
cagcaacgcttggtcaagcgcgtgatccgcgaactgggcctcgacgaacaacgctggcct
gcgcgtcaggcgcagtggtttatcaacggccagaaagacgaaggcttgcgcccgcaacat
atccaggccagcggcgatttgttcctcgccaccatgcgcagcatctatgaagcgtacgag
gcggcctgcgtacgcgccggcgtgatcgacttctccgagctgctgctgcgcgccctcgac
ctgtggcgcgacaaccccggcttgctggcgcattaccagaagcgcttccggcacattctg
gtggacgagttccaggacaccaacgccgtgcagtacgcctggttgcgcttgctggccaag
ggcggtgacagcctgatggtggtgggcgacgacgaccagtcgatctacggctggcgcggc
gcgaaaatcgagaacatctaccagtattccgacgacttcccggacgcaatcaccatccgc
ctggagcagaactaccgctccaccgccggcatcctcaaggctgccaacgcgctgatcgcc
aataacaccgggcgcatgggcaaagagctgtggaccgacggcggcgaaggcgaagcgatc
aacctgtacgccgcgttcaacgaacacgatgaagcgcgctatgtggtggaaaccatcgaa
agcgcgctgaaaaccggtttggcgcgcagcgatatcgccatcctgtatcgctccaacgcc
caatcgcgggtgttggaggaagccttgctgcgcgaacgcatcccgtaccgcatctatggc
ggccagcgcttcttcgagcgggcggaaatcaagaacgccatggcctacctgcgtttgctg
gaaggtcgtggcaacgatgcggcgctggagcgggtgatcaatatcccggcgcgtggcatc
ggcgaaaaaaccgtcgaagctattcgcgaccacgcgcgccacgccgatgtgtcgatgtgg
gaagccatgcgcttgctaatcgccaataaaggcctgaccggccgcgccgccggtgctttg
ggtgtgtttgtcgaactgatcgagaacctggcggccaagtgcgcagaaatgccgctgcac
ttgatgacccagaccgtgatcgagcagtccgggctgatcgcctatcacgaagcggaaaaa
ggcgagaaaggccaggcccgggtagaaaaccttgaggaactggtcagcgccgcccgcgcg
ttcgaaaacactgaagaagatgaagagctgaccccgctcgccgcgtttctgggtcatgcc
tcgctggaagccggcgatacccaggccgatgagcatgaagacagcatccagctgatgacc
ttgcacagcgccaagggcctggaatttccgtatgtgttcctggtgggcatggaagaaggc
ctgttcccgcacaagatgagcctggaagagcccggccgccttgaggaagaacgccgcctg
gcctacgtgggcatcacgcgtgccatgcagaacctggtgatgacctatgccgagacccga
cgcctgtacggcagcgaaacctacaacaaggtgtcgcgcttcgtacgtgaagtgccgaag
gggctgattcaggaagtgcgcctgtccaacagcgtcagccgcccgttcggcggcggccag
cagcagaactccagcaacctgtttgctggttccgagattccggaaacaccgttcagcctt
ggccagcaggtcaagcatgcgatctttggcgaaggcgtgattctcaacttcgaaggcgct
ggcgcccaggcacgggtgcaggtgaatttcgccgaaggcagcaagtggctgatgatgggc
tacgcgaagctcgaagcaatctga
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