Pantoea sp. SO10: FCN45_06915
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Entry
FCN45_06915 CDS
T06053
Symbol
ldtD
Name
(GenBank) L,D-transpeptidase
KO
K21470
L,D-transpeptidase YcbB
Organism
pans
Pantoea sp. SO10
Brite
KEGG Orthology (KO) [BR:
pans00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pans01002
]
FCN45_06915 (ldtD)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pans01011
]
FCN45_06915 (ldtD)
Peptidases and inhibitors [BR:
pans01002
]
Cysteine peptidases
Family C82
FCN45_06915 (ldtD)
Peptidoglycan biosynthesis and degradation proteins [BR:
pans01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
FCN45_06915 (ldtD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
QCP59120
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Position
1503493..1505322
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AA seq
609 aa
AA seq
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MLLNNKSKMSRAAVALGLSLVLSPLAVSHAAITSTLPNSTHHSSMSVAASQQQIQQAFSA
TEQPFYLPGLAGIYASRDMAPLWQDPQAVQAFQQQLAEVALSGVQPQFTRWVERLTNPNI
KGLARDIVLSDAMLGYLQFVANVPTQGETWLYSNVPYKLTMPSLAAINQWQNAVNGGGSR
TFVVSLQPQHPQYAPMHNALKTLLTDDRPWPQLRDTVTLRPGQISNDVPALREILQRTGM
LTASHSTTPTPAEDAVPTAPVPVSQSNQPVAVSPSAANFDDIDAAPALAATPEVSNNVAA
NPTATGPNVYDATLVEGVKRFQHWQGLADDGAIGPRTREWLNVPPQMRASLLALNIQRLR
LLPDDMHNGIMVNIPNYSLTYYNNGATILSSRVIVGRPDRKTPLMRSALNNVVLNPPWNV
PTTLVRQDIVPKVKQDPTYLYKHGYTLLSGWSADAEVIDPSMIDWRMVSAASFPYRIRQA
PGATNSLGRYKFNMPSSDAIYLHDTPNHNLFQRDIRALSSGCVRVNKASELADLLLQDVG
WNDGRISDTLKEGNTRYVPIRHRIPVNLYYLTAWVADDGQPQYRTDIYNYDNPARSGSQV
LHKAGQLLL
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgttgctaaacaataagagcaaaatgagtcgtgctgcagtagcactcggtttgtcactg
gtactatcgccgctggctgtgagccatgcggccatcacctccacgctacccaattcaacg
caccacagttcaatgtcggttgctgccagccagcagcagattcagcaggcgttcagcgcc
actgaacaacctttctatttgcccggtttagccggtatttatgcgtcgcgcgatatggct
ccgctatggcaagacccgcaagcggtgcaggctttccagcagcaattggcggaagtggcg
ctctctggcgtgcagccgcaattcacccgctgggttgagcgtctgaccaatccgaacatc
aaaggcctggcgcgcgacatcgtgctcagtgatgcgatgcttggctatctgcagtttgtt
gccaatgtgccgacacagggcgaaacctggctctacagcaatgtgccttacaagctgacc
atgccatctctggcggccatcaatcaatggcaaaatgcggtgaacggcggcggcagccgg
acttttgtggtctcgttgcaaccgcagcatccgcaatatgcgccgatgcataatgcgctg
aaaacgctactcaccgacgatcgcccgtggccacagctgcgtgataccgttacgctacgc
ccagggcagatcagtaatgatgtgcctgcgctgcgtgagattctgcaacgcaccggcatg
ttgaccgccagccatagtactacgccaacgccggcggaagacgcggtgccaactgcgccg
gttccggtgagccaaagcaatcagccggtggcggtgagcccgtctgcggcaaactttgat
gatattgatgcggctccggcactcgctgcgacgcctgaagtgtccaataatgtggctgcc
aatcctacagcaaccggacccaacgtgtatgacgctacgctggtggagggcgttaaacgc
ttccagcactggcagggattggccgatgacggcgcgattggtccacgtacccgtgaatgg
ctgaatgtgccgccgcagatgcgtgcttcgctgctggcgctcaacatacagcgcctgcgt
ctgctaccggatgatatgcataacggcatcatggtgaacatcccaaactattcgcttact
tactacaacaacggcgccaccattttgtcatcacgcgtgattgtgggtcgtcctgaccgc
aaaacgccgctgatgcgtagcgcgctgaataatgtggtgctcaatccaccgtggaacgtg
ccaaccacgctggtgcgccaggatattgtgccgaaggtgaaacaggatccgacttatctg
tataagcacggttatacgctgttgtcgggctggagtgcggatgcggaagtgatcgatcct
tcgatgattgactggcgtatggtgtcggccgcgagcttcccgtatcgcattcgacaggcg
ccgggcgcaaccaactcactgggtcgctacaaattcaacatgccgagttcggatgcgatt
tatctgcacgatacgccgaaccataacctgttccagcgcgatattcgtgcgctaagttcg
ggctgtgtgcgcgtgaataaagcctcagaactggccgatctgctgttgcaggatgtgggc
tggaacgacggtcgtatctcagacaccttgaaagagggaaatacccgttacgtgccgatt
cgccatcgtattcctgtgaacctttactatttaaccgcatgggtcgccgatgacggccag
ccgcaatatcgtacagatatttacaattatgataatcccgcccgttccggtagtcaggta
ctgcataaagccggtcagttgttactctag
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