Pantoea sp. At-9b: Pat9b_5301
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Entry
Pat9b_5301 CDS
T01386
Name
(GenBank) pseudouridine synthase
KO
K06177
tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:
5.4.99.28
5.4.99.29
]
Organism
pao
Pantoea sp. At-9b
Brite
KEGG Orthology (KO) [BR:
pao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pao03009
]
Pat9b_5301
03016 Transfer RNA biogenesis [BR:
pao03016
]
Pat9b_5301
Enzymes [BR:
pao01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
Pat9b_5301
5.4.99.29 23S rRNA pseudouridine746 synthase
Pat9b_5301
Ribosome biogenesis [BR:
pao03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Pat9b_5301
Transfer RNA biogenesis [BR:
pao03016
]
Prokaryotic type
tRNA modification factors
Psudouridine synthases
Pat9b_5301
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
ADU71460
UniProt:
E6WK48
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All DBs
Position
pPAT9B01:complement(176495..177193)
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AA seq
232 aa
AA seq
DB search
MAVILDTFIAPPCHEQIETLYQDEHLVLINKPAGLLSLSGKNPQNLDSVHHRLVKIFPGC
TLVHRLDFGTSGLMVIARNKAINAALCQQFSQRSVTKVYSALLCGHLENHEGVIDAAIAK
DPARFPLMSICATHGKPARSRYQVVERFNHELEEGTLLPLTRVQLIPETGRTHQLRIHCQ
LLGHPILGCDLYGGRLLPGSEKAPRLMLHASALNFVHPISGESINARHNSPF
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atggctgttattcttgatacctttattgccccaccgtgccatgagcagatagaaacgctc
tatcaggacgaacacctggtgctgatcaataaacctgccggactgcttagtctctcgggc
aaaaatccgcaaaatctcgattctgtacatcaccggctggtaaagatttttccgggctgt
accttggtacatcgccttgatttcggtacttccggcttgatggtgattgcgcgcaacaag
gcgatcaacgctgccctgtgccagcaattcagtcaacgtagcgtgaccaaggtttacagt
gcactgctgtgcgggcatctggaaaaccatgaaggggtgatagacgcggcgattgccaaa
gatccagcgcgctttccgctgatgtcgatttgtgccacccacggtaaacccgcccgttcc
cggtatcaggtggttgaacgtttcaatcatgagttggaagagggaacgttactgccgtta
acgcgggtacagctcattcctgagaccgggcgcacccaccaactccgcattcattgtcag
ctgctgggccaccctattttaggctgcgacctgtatggcggtcgcctgctacctggcagt
gaaaaagcccctcgactgatgctgcacgccagtgcgctgaattttgtgcatcccatcagc
ggagagtcaatcaatgcgcgtcacaacagcccgttttga
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