Pantoea ananatis PA13: PAGR_g2968
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Entry
PAGR_g2968 CDS
T01970
Name
(GenBank) AraC family transcriptional regulator Ada
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
paq
Pantoea ananatis PA13
Pathway
paq03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
paq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PAGR_g2968
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
paq03000
]
PAGR_g2968
03400 DNA repair and recombination proteins [BR:
paq03400
]
PAGR_g2968
Enzymes [BR:
paq01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
PAGR_g2968
Transcription factors [BR:
paq03000
]
Prokaryotic type
Helix-turn-helix
AraC family
PAGR_g2968
DNA repair and recombination proteins [BR:
paq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PAGR_g2968
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
GntR
RecR_HhH
HTH_23
Motif
Other DBs
NCBI-ProteinID:
AER33464
LinkDB
All DBs
Position
3217198..3218640
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AA seq
480 aa
AA seq
DB search
MFDPDTAYQALTSRDTRFDGVFFVGVTSTGIYCRPICPVKPPMQKNCVFFSSAEAAEKAR
FRPCLRCRPELAPGNAPVDNAHRVADRLVQRIEEGLLEEHAGLDDIATEFGMSARQLRRI
VQQELGVTPLELKQTRRMLLAKQLLTETTLPVTDVAYASGFGSLRRFNDVFQARYRMTPG
ALRKTAPQPTQQPGDTMQLQLSYRPPYDWQAMLDFLQLRLMKEIEAVEGQTYRRTVALGQ
YRGWVSVSPLPARHALRVEFTLSLTPVLPALLRRLRDLFDLNAQPQRIAAHLQQDPLLAQ
SLHDAPGLRVPGAFDSVEMGVRAILGQQVTVKAATTLSSRFAQAFGEPCSTPFPDLSRYT
VQPQRIAQATVDEIASLGIVSARARAILAFAGACVEGSLRFNATLTPDEIMTRLVALPGI
GPWTAHYIAMRALRWPDAFPKEDIAIRNKLGGLTPKAAEVRSQQWRPWRSYAVMHIWKSL
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgtttgatccagatacggcttaccaggcgttaacgtcgcgggatacgcgttttgacggc
gtgttttttgttggcgtgacctcaaccggcatttattgtcgtccgatatgtccggttaag
ccgccgatgcaaaaaaactgcgtgttctttagcagtgctgaggccgcggagaaagcacgt
tttcgcccctgcctgcgctgtcgtcctgaactggcacctggtaatgcgcccgtcgacaat
gcccacagagtcgctgaccgtctggtgcagcgcattgaagaggggttgctggaagagcac
gcagggctggacgacatcgccaccgagtttggcatgagtgcccgtcagctgcggcggatt
gtgcagcaggagttaggcgtcaccccgctggagctgaaacagacacggcgcatgttgctg
gccaagcagctactgaccgaaaccacgctcccggttaccgatgttgcctacgccagcggc
ttcggcagtttacggcgctttaatgacgtgttccaggcccgctatcgcatgacacccggc
gccttgcgaaaaaccgcgccgcaacccacacagcagccaggcgataccatgcaactgcag
ctcagctatcgcccgccctatgactggcaggcaatgctggattttctgcagttgcggttg
atgaaagagattgaagccgttgagggccaaacctaccgcagaaccgtggcgctgggtcag
tatcgcggctgggtcagcgtttcaccgctcccggccaggcatgcgctccgcgttgagttc
acgctgtccctgacgccggtattacctgcactcctgcgccgcctgcgcgatctgttcgac
ctgaacgcgcagccgcagcgaattgcggctcacctgcagcaggatcctctgctggcacaa
agccttcatgacgctcccggcctgcgcgtgcctggcgcgtttgacagcgttgaaatgggc
gtccgtgccattctgggtcagcaggtcaccgtgaaagcagcgaccaccctcagcagccgt
tttgcccaggcgtttggtgagccctgctcgacgccattcccggacctttcccgctatact
gtccagccacagcgcatcgcacaggcgacggtcgatgagattgccagccttgggattgtc
agcgcgcgagccagagcgattctggcgtttgcaggtgcctgtgttgagggcagcctgcgt
tttaacgctacgctcacgcctgatgagatcatgacgcggctggtcgcgctgccgggcatt
ggcccctggaccgcgcattacatcgccatgcgcgcactgcgctggcctgatgcttttccc
aaagaggatattgccatacgcaataagctgggaggcctgacacctaaggccgcagaagtt
cgttcgcagcagtggcgcccgtggcgcagctatgccgtgatgcatatctggaaaagcctg
taa
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