KEGG   Pectobacterium aquaticum: DMB82_0005095
Entry
DMB82_0005095     CDS       T07653                                 
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
  KO
K11900  type VI secretion system protein ImpC
Organism
paqu  Pectobacterium aquaticum
Brite
KEGG Orthology (KO) [BR:paqu00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:paqu02044]
    DMB82_0005095 (tssC)
Secretion system [BR:paqu02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   DMB82_0005095 (tssC)
SSDB
Motif
Pfam: VipB VipB_2
Other DBs
NCBI-ProteinID: UEM40393
LinkDB
Position
1086086..1087564
AA seq 492 aa
MSIVEEQVQAGAASASGSLLDDIMAQARISPVDEGYSVAKQGIAALVANILDSGNAAEPV
NKALVDSMIVELDKKLSKQIDVILHAKELQELESSWRSMKLLIDRTDFRENIKLLVLHAT
KEELLEDFEFAPEISQSGFYKHVYSSGYGQFGGQPIGGVIGDYALTQSSPDIKLMQYVSA
VGAMAHAPFISSVAPTFFGVDRFTDLPSIKDLKSVFEGPAYTKWRSLRESEDGRYLGLTA
PRFLARLPYDPVENPIKGFNYKEDISTNHEHYLWGNTAYLMGTALTDSFAKYRWCPNIIG
PQSGGAITDLPVHVYEAMGQLQAKIPTEVLITDRREYEMAEEGFITLTMRKDSDNAAFFS
ANSVQKPKVFPNTKEGKEAETNYKLGTQLPYMFIINRLAHYIKVLQREQIGSWKERQDLE
RELNTWIKQYIADQENPPADVRSRRPLRAAQIKVLDVEGEPGWYQVTMSVRPHFKYMGAN
FELSLVGRLDKE
NT seq 1479 nt   +upstreamnt  +downstreamnt
atgtcaatagttgaagaacaggttcaggcaggagccgccagtgcttctggatcgctgctt
gatgacatcatggctcaagcgcgtatcagcccggttgatgaaggctacagcgtggctaaa
cagggcattgccgcgctggttgctaacattcttgatagcggtaacgcagcagaacccgtg
aacaaagcgctggtcgatagcatgatcgtcgaactggacaaaaagctcagcaagcagatt
gacgttattctgcatgcgaaagaattacaggaactggaatcttcctggcgttcgatgaaa
ctgcttatcgatcgcaccgatttccgtgaaaacatcaaactgttggtgttgcatgcgacg
aaagaagagctgttggaagatttcgaattcgcgcctgaaatctcacagtctggcttctac
aagcacgtgtattccagcggttatggccagtttggtggtcagcctatcggtggcgtgatc
ggtgactatgcgctgacgcaaagctcaccagacattaagctgatgcagtatgtcagcgcc
gttggtgcgatggcgcatgcgccgttcatctcttccgttgctccaaccttctttggcgtg
gatcgcttcaccgatctgccttccatcaaagatctgaagtccgttttcgaaggcccggcc
tacacgaaatggcgctcgctgcgtgagtctgaagatggccgctatctggggctgacggca
ccgcgcttcctggctcgcctgccttatgacccagtagagaacccgattaagggcttcaac
tacaaggaagatatcagcaccaatcacgaacactatctgtggggcaataccgcctatctg
atgggaacggcgctgacggacagcttcgcgaaataccgctggtgtccgaacatcattggc
ccgcagagcggtggtgcgattaccgacctgccagtacatgtttatgaagccatgggccaa
cttcaggccaagatcccgactgaagtcctgatcaccgatcgtcgcgaatatgaaatggcc
gaagaaggctttatcacgctgacgatgcgtaaagacagcgacaatgcggccttcttctcg
gctaactcggtgcagaagccgaaggtgttcccaaacaccaaagaaggcaaagaagcggaa
accaactacaagctgggtacgcaactgccgtacatgttcatcatcaaccgtctggcgcac
tacatcaaagtgctacagcgtgaacagattggttcatggaaagagcgtcaggatcttgag
cgtgagttgaatacctggattaaacagtacatcgccgatcaggaaaacccgccggcagat
gttcgtagccgtcgtcctctgcgtgccgcacaaatcaaagtgttggatgtagaaggagaa
ccaggttggtatcaggtcaccatgtctgtgcgcccgcacttcaagtacatgggggcgaac
tttgagctgtcgctggtagggcgtttggataaggaataa

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