Pectobacterium aroidearum: I2D83_04840
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Entry
I2D83_04840 CDS
T07244
Symbol
garD
Name
(GenBank) galactarate dehydratase
KO
K01708
galactarate dehydratase [EC:
4.2.1.42
]
Organism
pari
Pectobacterium aroidearum
Pathway
pari00053
Ascorbate and aldarate metabolism
pari01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pari00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00053 Ascorbate and aldarate metabolism
I2D83_04840 (garD)
Enzymes [BR:
pari01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.42 galactarate dehydratase
I2D83_04840 (garD)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GD_AH_C
GD_AH_second
SAF
Motif
Other DBs
NCBI-ProteinID:
QPI43948
LinkDB
All DBs
Position
complement(1077504..1079078)
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AA seq
524 aa
AA seq
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MSDKSESNAAQEQPLYIKVHDSDNVAIVVNNNGLRAGTRFNDHLELIEHVPQGHKVALVN
IEKSGAIIRYGEIIGYALRDIAKGSWIDESLVELPLAPALDTLPLATKIPPTLPPLEGYT
FEGYRNADGSVGTKNLLGISTSVHCVAGVVDYVVKIIERDLLPNYPNVDGVVALNHLYGC
GVAINAPAAVVPIRTIHNLALNPNFGGEILVVGLGCEKLQPERLLEGTSDVQAISLDDTS
IVRLQDEHHVGFRSMVDDILTMADKHLQQLNKRQRETCPASELVVGMQCGGSDAFSGVTA
NPAVGFASDLLVRCGATVMFSEVTEVRDAIHLLTPRAINEEVGKRLLEEMAWYDNYLDSG
QTDRSANPSPGNKKGGLANVVEKALGSIAKSGTSAIVEVLSPGQRPTKRGLIYAATPASD
FVCGTQQLASGITVQVFTTGRGTPYGLLAVPVIKMATRTALANRWHDLMDIDAGTIATGE
ATIEDVGWQLFHFILDIASGKKKTWSDQWGLHNALAVFNPAPVT
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgtcagataaatcagaaagtaatgctgcacaagagcagccactttatattaaagtccac
gattcagataatgttgccattgttgttaataataatggcttacgcgccggaacccgtttt
aatgatcatctggaattaattgagcatgttccacaggggcacaaagttgcccttgttaat
atcgaaaaatcaggcgcaatcatccgctatggtgaaattatcgggtatgcgctgcgcgat
attgctaaaggaagctggattgatgaatccttagtcgagttacctctggctcccgcgctg
gacaccctgccgctggcgaccaaaatcccgcccacccttcctccactggaaggctacacc
tttgaaggttatcgcaacgccgatggcagcgtaggcacgaaaaatctgttgggcattagc
accagcgtgcactgtgtcgcgggcgtagtggactatgtcgtcaaaattatcgagcgggat
ttattgcccaactatcccaacgtggatggtgttgtcgcactcaaccatctctatggctgc
ggcgtagcaatcaatgcgcctgcggcggtcgtccctatccgcactatccacaatctggca
ctgaacccgaattttggcggtgagatattggtggtgggtctgggttgtgaaaaattacag
ccagaacgcctgctggaagggacgtcagacgtacaggccatctccctcgacgacaccagt
attgtccgcttgcaggatgaacaccatgttggtttccgatcgatggtggatgacattctg
acgatggcagacaagcacctgcaacagttgaacaaacgtcagcgtgaaacctgcccggca
tcagaattggttgtcggcatgcagtgcggtggcagcgatgctttctctggcgtcaccgct
aacccagctgtcggttttgcatccgacctgctggtacgctgcggcgcaaccgtgatgttc
tccgaagtgaccgaagtgcgcgacgccattcatctgttaacgccgcgcgccatcaatgaa
gaagtcggtaaacgtctgctggaagaaatggcctggtacgacaattacctcgacagcggc
cagaccgatcgtagcgccaacccatcgccgggcaacaaaaaaggggggctggcgaacgtg
gtggaaaaagcgctcggctccatcgccaaatccggtaccagcgccattgtcgaagtcctg
tctcccggccagcgccccaccaaacgcgggctgatttacgccgcaacgccagccagtgac
ttcgtgtgcggcacgcagcagctcgcttccggcatcaccgtgcaggtcttcaccaccggt
cgcggtacaccgtatggcctattggctgtacccgtgatcaagatggcaacccgtaccgca
ttggctaaccgctggcacgatctgatggatattgatgccggtaccatcgctactggagaa
gccacgattgaagacgtgggctggcagcttttccacttcattctggacatcgccagcggc
aagaaaaaaacctggtccgatcaatggggacttcataacgcactggccgttttcaatccg
gcaccggtaacctga
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