Pectobacterium aroidearum: I2D83_20205
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Entry
I2D83_20205 CDS
T07244
Name
(GenBank) transcription antiterminator
Organism
pari
Pectobacterium aroidearum
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PRD
HTH_11
Mga
HTH_DeoR
PuR_N
PTS_IIB
HTH_Mga
HTH_17
HTH_6
GerE
HTH_Tnp_1_2
SpoIIID
HTH_22
HTH_29
Terminase_5
AbiEi_4
HTH_23
HTH_Tnp_ISL3
HTH_5
Sigma70_ECF
TetR_N
TrmB
HTH_7
Motif
Other DBs
NCBI-ProteinID:
QPI42709
LinkDB
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Position
4538077..4539627
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AA seq
516 aa
AA seq
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MMQPLTSRQNRLLKYLLQHQGYVTVKDIAHYLDVSEKTVYRDMQFVEAFLSVWNIYPDKK
VGAGIMLTTDDDRHLTLLEQQIVVDDGETDALINNARRVKIASQLLSDTPHETSISKLSE
RYFISSASIVNDLKIIESWLHPLGLALVRSQSGTHIEGSENQVRQAMASLINDVMHHKEP
GPLNHSRLDPGSYKALINYFGEEDVSFVESLLQDMERQLSYPLGEPYYINIFTHTLIMMH
RIAQGKALMMAEESVHQQVDNRIFSIAQNMVSQIEQRVESTLPSDEVWFIYQYIISSGIV
MEERSDNQLLRYQFSNGESRRITHALTQIFSDLINIDLRTDKLLHEGLLIHIKPLLNRLK
YQIHIRNPLLDDIKSEFIDIYDMTQQAMDEVCQRFQLKPVAEDEIGYLTIHFQAALERQI
AHKRILVVCSSGVGTSHLLKNRILRAFPDWIIVGVVSASNMQRFCQQEEIELIISTIHLE
EQHIPVVYVSAFFNDDDIKRVTEKVIANQLHQAVPH
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgatgcagccactcacctcccgtcagaaccgtttattgaaatatctgttacaacaccag
ggatatgtaacggttaaagatattgcacattacctcgatgtgtctgaaaaaactgtctat
cgtgatatgcaatttgtcgaagccttcctttctgtctggaatatttatccagacaaaaag
gtcggtgcgggaatcatgttaaccacggatgacgatcgccatctcacactgttagagcag
caaattgtcgtggacgacggagagaccgatgcgctgatcaacaatgcgcgtcgcgtcaaa
attgcctcacaactgctgagtgacacgcctcatgaaacatccatcagcaagctgtcagaa
cgctactttatcagcagcgcctctatcgttaacgatctgaaaatcatcgaaagctggtta
catccactggggctggcgctggtgcgcagccagagcggcacgcacattgaaggcagtgag
aatcaggtgcgtcaggcgatggcctcgctcattaatgacgtcatgcaccataaagaacct
ggcccgcttaaccattctcgtctcgaccccggcagctataaggcactgatcaactatttc
ggtgaagaagacgtgtccttcgtcgaatcgctgttacaggacatggaacgacaactttct
tatccactcggtgagccttattacatcaatattttcacgcataccttaattatgatgcac
cgcattgcgcagggaaaagcgttaatgatggcggaagaatccgttcatcagcaggttgat
aatcgtatattctcgatcgctcaaaacatggtgagccaaatagagcagcgcgtcgagagc
acactgccttctgatgaagtctggtttatttaccaatatattatttcctccggcattgtg
atggaggaacggtcggataaccaactgcttcgctatcaattttctaacggtgaatcacgc
agaatcacgcatgcactgacgcagatattttctgatttaattaatatcgatttgcgcaca
gataagttattacatgaaggattacttattcacatcaagccattgcttaaccgcttaaag
taccaaatacatattcgcaacccgttattagacgatatcaaaagcgaatttatcgatatt
tatgatatgactcagcaagcaatggacgaagtctgtcagcgatttcaattaaaaccggtc
gctgaagatgaaatcggctatctgaccattcattttcaagccgcgctggaacgccaaatt
gcgcataaacgtattctggtggtgtgttccagcggcgtaggaacgtcacacctgttgaaa
aaccgcatcctgcgcgcattccctgactggattattgttggcgtggtttcggccagcaat
atgcagaggttttgccagcaggaagagattgagctgattatttccacgattcatctggaa
gaacaacacattcctgtcgtctatgtttccgccttttttaatgacgatgacattaaacgc
gttaccgaaaaagttatcgccaatcaactgcatcaggccgtcccccactga
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