Pseudomonas asiatica: LG197_07975
Help
Entry
LG197_07975 CDS
T08841
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
pasi
Pseudomonas asiatica
Brite
KEGG Orthology (KO) [BR:
pasi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pasi03000
]
LG197_07975
Transcription factors [BR:
pasi03000
]
Prokaryotic type
Helix-turn-helix
Other families
LG197_07975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
HTH_8
HTH_23
AbiEi_4
IclR
HTH_17
HTH_30
AAA_16
LZ_Tnp_IS481
HTH_28
AAA_2
AAA_5
HTH_29
HTH_50
Xre-like-HTH
HTH_IclR
RWP-RK
HTH_7
HTH_32
HTH_22
Motif
Other DBs
NCBI-ProteinID:
WDM89997
LinkDB
All DBs
Position
1754202..1756055
Genome browser
AA seq
617 aa
AA seq
DB search
MLAANSRAHVDCVSRVLKNADRLPQAPVPPLILDSWRRSMELYRLDPGSQQGPRILSQSL
LNECRERAELFLRIASDAVARLHERVRGADYCVLLTDALGRTIDYRVESAIRNDCRKAGL
YLGTCWSEGEEGTCGVAAVLTSKAPVTVHKRDHFRAAFIGLTCTAAPVFDPLGELLGVVD
VSALQSPDDRRSQHLIRQLVEQTAREIENAFFMHSAQGHWVMRAHGTPGYVESQPDYLLA
WDGDGRLQAINSLARQRLVEHLGRLPEHIGELFDMDQLRRVNASSAQRLPGLGGLYGRVS
APRQRQRAQPLRQAQDARIEQHLRLATRVKDCNLAVLVQGETGAGKEVFARQLHQQSLRR
DGPFVTLNCAAIPESLIESELFGYVAGAFTGASSKGMQGLLQQADGGTLFLDEIGDMPLN
LQTRLLRVLAEGEVAPLGAARRERVDIQVICATHRDLAAMVEDGRFREDLYFRLANARFE
LPPLREREDRLGLIHQLLAEEAEACGVEVVLADDALQALLVYRWPGNLRQLRQVLRYACA
VSEDGRVQVQDLPQEVRGEVVASAESSMSCPARQLLLDALIRHRWKPADAARALGISRAT
LYRRVHEHHIEMPRMKG
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgcttgccgcgaactcccgagcccatgtcgactgcgtcagcagggtgctgaagaatgcc
gaccgcctgccgcaggcgccggtgccaccgctgatcctcgattcatggcgccgttccatg
gagctgtaccgcctcgaccccgggtcccagcaggggccgcgcatcctgtcccaaagcctg
ctcaacgaatgccgcgagcgcgctgaactgttcctgcgcatcgccagcgatgccgtggcc
cgcctgcatgagcgggtgcgcggtgccgactactgcgtgctgctcaccgacgccttgggg
cgcaccatcgattaccgggtcgagtcggccatccgcaacgattgccgaaaggccgggctg
tacctgggcacctgctggtcggagggcgaggagggcacctgcggcgtggcggcggtgttg
accagcaaggcgccggtcacggtgcacaagcgcgaccacttccgcgccgcgttcattggc
ctgacctgtacggcggcaccggtgttcgacccgctgggcgagttgctgggcgtggtggat
gtctcggccttgcagtcgccggacgaccgccgcagccagcacctgatccgccaattggtc
gagcagactgcgcgcgagatcgaaaatgccttcttcatgcacagtgcccagggccattgg
gtaatgcgtgcccatggcacgccgggctatgtggaaagccagcccgactacctgctggcc
tgggatggcgatggccgcctgcaggcgatcaacagcctggcgcgccagcgcctggtggag
catctggggcgtttgcccgagcacattggcgagctgttcgacatggatcagttgcgccgc
gtgaacgcatcgtccgctcaacgcctgccgggcctgggtggtctgtacggccgggtcagc
gcaccccgacagcgccagcgtgcgcagccgttgcgccaggcccaggacgcccgtatcgag
cagcatctgcgcctggccacgcgggtcaaggactgcaacctggcggtgcttgtgcaaggc
gagacgggggctggcaaagaggtgttcgcccgccagctgcatcagcaaagcctgcgtcgc
gatggcccgttcgtcaccttgaactgcgcggccatcccggaaagcctgatcgagagcgag
ctgttcggctatgtggccggggccttcaccggggcttccagcaaaggtatgcaggggctg
ttgcagcaggccgatggcggcacgctgttcctcgacgaaatcggtgacatgccgctgaac
ctgcaaacccggttgctgcgcgtgctggcggagggtgaagtggcgccgctgggcgcggcg
cggcgggagcgggtggatattcaggtgatttgcgcgacccaccgcgatttggcggcgatg
gtggaggatgggcgttttcgtgaggacctgtacttccgcctggccaatgcccgcttcgag
ttgccgccgctgcgcgagcgtgaggaccgcttggggttgattcaccagttgctggccgag
gaagccgaggcctgcggagtcgaggtggtgttggcggatgatgcgctgcaggcgctgctg
gtttaccgctggccggggaatttgcgccagctgcggcaggtgttgcgctatgcatgtgcg
gtgagcgaggacgggcgggtgcaggtgcaggacctgccgcaggaggtgcgcggcgaggta
gtcgcgtcggctgaaagcagcatgtcctgtccggcccggcagttgctgctggatgcgctg
atccgccatcgctggaagccggccgatgcggcgcgggctctgggaatatcgcgggcaacc
ttgtaccggcgggtgcatgagcaccacatcgagatgccgcggatgaaggggtag
DBGET
integrated database retrieval system
