Pseudomonas asiatica: LG197_21745
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Entry
LG197_21745 CDS
T08841
Name
(GenBank) OprD family porin
Organism
pasi
Pseudomonas asiatica
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Gene cluster
GFIT
Motif
Pfam:
OprD
Motif
Other DBs
NCBI-ProteinID:
WDM87224
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Position
complement(4713871..4715160)
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AA seq
429 aa
AA seq
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MFAPFPLAPGRRVAGLFLLCAGVNAQAAGFLEDSSAKVEARNVYFNRDFRDGHSSSSQGA
SKREEWAQGFILNVQSGYTQGPVGFGVDALGMFGFKLDSSPADSNSGLLPSSGHDPRHSA
DQYAKMGLAAKVKVSSTVLKYGSMMPDVPLLKYNDGRLLPTMFHGAMLTSEEVRDLKFTL
ARLDKYTARDSTDRQDIRVHCKNKRYACGIEADHFDLAGVDYRFNERFSAQYQVAKLENI
YRQHFLGLVASQPLAVGSLSADLRLIKSDDIGNARAGEIDHRAFSGMLGYSLGGHKLSAG
WQRMYGDSAMPYLDGTNPYLVNYAQVNDFAAAQERSWQVRYDYDFKALGVPGLTFFTRYI
NGDNIKVPGSTAEGKEWERDTEFKYQVQGGTFKDVSVRLRNSTYRSNYEKWARDMDETRV
IVSYNFSIF
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcccctttccccctcgcccccgggcgtcgtgttgccggcttgttcctgttgtgt
gccggcgtcaatgcccaggccgccggttttcttgaagacagcagtgcaaaggtcgaagca
cgcaatgtctatttcaaccgggattttcgtgacggccacagcagttccagccagggtgcg
tccaaacgcgaagaatgggcacaaggtttcatcctcaatgtgcagtcgggttacacgcag
gggccggtaggttttggcgtggatgcgctgggcatgttcggcttcaaacttgactccagc
ccggcggacagtaacagcggcctgttgccgtcttccggtcacgacccgcgccactcggcc
gaccagtacgcgaagatgggcctggcggccaaggtcaaggtttccagtaccgtgctcaag
tacggttcgatgatgccggatgtaccgttgctcaagtacaacgatggccgcctgctgccg
accatgttccatggcgccatgctcacttccgaagaagtgcgcgacctgaagttcaccctg
gcccgcctggacaagtacaccgcacgggattccaccgaccgccaggacattcgcgtgcat
tgcaagaacaagcgctatgcctgcggtatcgaggctgatcacttcgacctggctggtgtc
gattaccgtttcaacgaacgcttcagcgcccagtaccaggtggccaagctggagaacatc
taccgccagcacttcctcggcctggtggccagccagccattggcggtgggcagcctgtcg
gcagacctgcgcttgatcaagagtgatgacatcggcaatgcccgcgccggcgaaatcgac
catcgcgcgttcagcggcatgctcggctacagcctgggtggccacaagctcagtgccggt
tggcagcgcatgtatggcgacagtgccatgccatacctggatggcaccaacccttacctg
gtcaactatgcccaggtcaacgacttcgccgccgcccaggagcgttcctggcaggtgcgt
tatgactatgacttcaaggccctgggcgtgcctggcctgaccttcttcacccgttacatc
aacggtgacaatatcaaggtgccgggcagtacggccgaaggcaaagagtgggaacgcgac
accgagttcaagtaccaggtgcaaggtggcacgttcaaggacgtaagcgtgcgtctgcgt
aattcaacttaccgcagcaattatgaaaaatgggcgcgtgacatggacgagacacgggtc
atcgtcagctacaacttctccatcttctga
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