Pseudomonas asiatica: LG197_25540
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Entry
LG197_25540 CDS
T08841
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K10943
two-component system, response regulator FlrC
Organism
pasi
Pseudomonas asiatica
Pathway
pasi02020
Two-component system
pasi02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pasi00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LG197_25540
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
LG197_25540
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
pasi02022
]
LG197_25540
02035 Bacterial motility proteins [BR:
pasi02035
]
LG197_25540
Two-component system [BR:
pasi02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
LG197_25540
Bacterial motility proteins [BR:
pasi02035
]
Flagellar system
Flagellar assembly proteins
Others
LG197_25540
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
AAA_16
MCM
AAA
FleQ
HTH_20
HTH_30
MerR
AAA_3
AAA_2
DUF2249
AAA_19
HTH_28
HTH_24
Mg_chelatase
HTH_23
HTH_11
Sigma70_r4_2
nSTAND3
HTH_1
AAA_22
ATPase
HTH_17
HTH_Mga
AAA_7
Motif
Other DBs
NCBI-ProteinID:
WDM87921
LinkDB
All DBs
Position
complement(5494692..5496047)
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AA seq
451 aa
AA seq
DB search
MAIKVLLVEDDRVLRQALGDTLEIGGFAYQAVGSAEEALEAVLEEAFSLVVSDVNMPGMD
GHQLLAQLRRQQPQLPVLLMTAHAAVERAVEAMRQGAADYLVKPFEPKALLSLVERHAAG
RVAEEEGPVACEPASRQLLELATRVARSDSTVLISGESGTGKEVLARFIHQQSPRAAQPF
VAINCAAIPDNMLEATLFGHEKGAFTGAIAAQAGKFEQAEGGTLLLDEISEMPMALQAKL
LRVLQEREVERVGGRKPISLDIRVLATTNRDLAGEVAAGRFREDLYYRLSVFPLAWRPLR
ERPGDILQLAERLLARHVAKMKHAPVQLSPQARACLQAYAWPGNVRELDNALQRALILQQ
GGVIEAADFCLAGAIPLSAGIEPSSEVVAEPGGLGDDMRRHEYQMIIDTLRAERGRRKEA
AERLGISPRTLRYKLAQMRDAGFDVEASLFG
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atggcgatcaaggtgctgctggtcgaggacgaccgcgtattgcgccaggcgctgggcgat
accctggaaatcggcggcttcgcctaccaggcggtgggcagtgccgaagaagcgctggaa
gcggtgctggaggaggccttcagcctggtggtcagcgatgtgaacatgccaggcatggat
gggcaccaactgctggcccagctgcgccgccagcaaccgcaattgcccgtgttgctgatg
accgcgcatgccgcggtggagcgtgccgtcgaggcaatgcgccaaggggctgccgactat
ctggtcaagccattcgaacccaaggctttgctcagcctggtcgagcggcatgccgccggg
cgcgtggctgaagaggaaggcccggtggcctgcgagccggccagtcgacagttgctggag
ctggccacgcgggtggctcgcagtgactcgaccgtgctgatttccggcgaatccggtacc
ggcaaggaagtgctggcgcgcttcattcaccagcagtcgccgcgggcggcgcagcccttc
gtggcgatcaattgtgctgccatccccgacaacatgctcgaggccaccctgttcggccac
gagaagggtgccttcaccggtgccatcgctgcccaggcaggcaagttcgagcaggctgaa
ggtggcaccttgctgctcgatgaaatctcggaaatgccaatggccttgcaggccaagctg
ctgcgcgtgctgcaggagcgcgaggtggaacgggtgggcgggcgcaagcccatcagcctg
gatattcgcgtgttggccactaccaaccgtgacctggctggcgaagtggcggccgggcgt
ttccgtgaagatttgtactaccgcctgtcggtgttccccctggcctggcgcccgctgcgc
gaacgcccgggtgacatcctgcaactggccgagcgcctgttggcgcgtcacgtggcgaag
atgaagcacgcccccgtgcagctgtcgccccaggcccgagcctgcctgcaggcgtatgcc
tggccgggcaacgtacgcgaactggacaacgccctgcagcgggcgctgatcctgcagcag
ggcggggtgatcgaggcggcggatttttgtctggcgggcgccattccattgtcagctggc
atagagccatcatccgaggtggtggccgagcccggtgggctgggcgatgacatgcgtcgt
catgagtaccagatgatcatcgacaccctgcgcgccgagcgcggccgccgcaaagaggcg
gccgaacgcctggggataagcccgcgtaccctgcgctacaagctggcgcagatgcgcgat
gccgggtttgacgtcgaggccagcctgttcggctga
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