KEGG   Pseudomonas asiatica: LG197_25540
Entry
LG197_25540       CDS       T08841                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
  KO
K10943  two-component system, response regulator FlrC
Organism
pasi  Pseudomonas asiatica
Pathway
pasi02020  Two-component system
pasi02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:pasi00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    LG197_25540
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    LG197_25540
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:pasi02022]
    LG197_25540
   02035 Bacterial motility proteins [BR:pasi02035]
    LG197_25540
Two-component system [BR:pasi02022]
 Other families
  FlrB-FlrC (polar flagellar synthesis)
   LG197_25540
Bacterial motility proteins [BR:pasi02035]
 Flagellar system
  Flagellar assembly proteins
   Others
    LG197_25540
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 HTH_8 AAA_5 AAA_16 MCM AAA FleQ HTH_20 HTH_30 MerR AAA_3 AAA_2 DUF2249 AAA_19 HTH_28 HTH_24 Mg_chelatase HTH_23 HTH_11 Sigma70_r4_2 nSTAND3 HTH_1 AAA_22 ATPase HTH_17 HTH_Mga AAA_7
Other DBs
NCBI-ProteinID: WDM87921
LinkDB
Position
complement(5494692..5496047)
AA seq 451 aa
MAIKVLLVEDDRVLRQALGDTLEIGGFAYQAVGSAEEALEAVLEEAFSLVVSDVNMPGMD
GHQLLAQLRRQQPQLPVLLMTAHAAVERAVEAMRQGAADYLVKPFEPKALLSLVERHAAG
RVAEEEGPVACEPASRQLLELATRVARSDSTVLISGESGTGKEVLARFIHQQSPRAAQPF
VAINCAAIPDNMLEATLFGHEKGAFTGAIAAQAGKFEQAEGGTLLLDEISEMPMALQAKL
LRVLQEREVERVGGRKPISLDIRVLATTNRDLAGEVAAGRFREDLYYRLSVFPLAWRPLR
ERPGDILQLAERLLARHVAKMKHAPVQLSPQARACLQAYAWPGNVRELDNALQRALILQQ
GGVIEAADFCLAGAIPLSAGIEPSSEVVAEPGGLGDDMRRHEYQMIIDTLRAERGRRKEA
AERLGISPRTLRYKLAQMRDAGFDVEASLFG
NT seq 1356 nt   +upstreamnt  +downstreamnt
atggcgatcaaggtgctgctggtcgaggacgaccgcgtattgcgccaggcgctgggcgat
accctggaaatcggcggcttcgcctaccaggcggtgggcagtgccgaagaagcgctggaa
gcggtgctggaggaggccttcagcctggtggtcagcgatgtgaacatgccaggcatggat
gggcaccaactgctggcccagctgcgccgccagcaaccgcaattgcccgtgttgctgatg
accgcgcatgccgcggtggagcgtgccgtcgaggcaatgcgccaaggggctgccgactat
ctggtcaagccattcgaacccaaggctttgctcagcctggtcgagcggcatgccgccggg
cgcgtggctgaagaggaaggcccggtggcctgcgagccggccagtcgacagttgctggag
ctggccacgcgggtggctcgcagtgactcgaccgtgctgatttccggcgaatccggtacc
ggcaaggaagtgctggcgcgcttcattcaccagcagtcgccgcgggcggcgcagcccttc
gtggcgatcaattgtgctgccatccccgacaacatgctcgaggccaccctgttcggccac
gagaagggtgccttcaccggtgccatcgctgcccaggcaggcaagttcgagcaggctgaa
ggtggcaccttgctgctcgatgaaatctcggaaatgccaatggccttgcaggccaagctg
ctgcgcgtgctgcaggagcgcgaggtggaacgggtgggcgggcgcaagcccatcagcctg
gatattcgcgtgttggccactaccaaccgtgacctggctggcgaagtggcggccgggcgt
ttccgtgaagatttgtactaccgcctgtcggtgttccccctggcctggcgcccgctgcgc
gaacgcccgggtgacatcctgcaactggccgagcgcctgttggcgcgtcacgtggcgaag
atgaagcacgcccccgtgcagctgtcgccccaggcccgagcctgcctgcaggcgtatgcc
tggccgggcaacgtacgcgaactggacaacgccctgcagcgggcgctgatcctgcagcag
ggcggggtgatcgaggcggcggatttttgtctggcgggcgccattccattgtcagctggc
atagagccatcatccgaggtggtggccgagcccggtgggctgggcgatgacatgcgtcgt
catgagtaccagatgatcatcgacaccctgcgcgccgagcgcggccgccgcaaagaggcg
gccgaacgcctggggataagcccgcgtaccctgcgctacaagctggcgcagatgcgcgat
gccgggtttgacgtcgaggccagcctgttcggctga

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