KEGG   Pseudomonas asturiensis: N015_15215
Entry
N015_15215        CDS       T08470                                 
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
  KO
K11914  sigma-54 dependent transcriptional regulator
Organism
past  Pseudomonas asturiensis
Brite
KEGG Orthology (KO) [BR:past00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:past03000]
    N015_15215
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:past02044]
    N015_15215
Transcription factors [BR:past03000]
 Prokaryotic type
  Helix-turn-helix
   Other families
    N015_15215
Secretion system [BR:past02044]
 Type VI secretion system
  Imp/Vas secretion system related proteins
   N015_15215
SSDB
Motif
Pfam: Sigma54_activat Sigma54_activ_2 HTH_8 GAF_2 GAF AAA_5 HTH_50 AAA_2 HTH_30 AAA_16 AAA AAA_7 TsaE
Other DBs
NCBI-ProteinID: QHF03687
UniProt: A0AA92F9L1
LinkDB
Position
complement(3401232..3402746)
AA seq 504 aa
MFSSVQHPLGYAQQLCSIYTHLSQAADDAMLLNDFVHSASRLSGCELSQLFMFDVTPGCL
KLKAQVLDGNIRSGSPDNDVTDHSAEHLFQFVVRNGKPVSISDLSCALYNTCFLPGSESA
WRSLVCVPLMNRDQTVAGLLVCASREVMSLEVFAASLGSLGTFVVSQQALLRRHQPLASA
SMTEPQSAVSSYGLISNSAAMRQTCELVGKVLQSPYTVLLTGETGTGKEVVARAIHDHGP
RRSKAFVVQNCAAFPESLLESELFGYRKGAFTGADRDHRGLFDVAHEGTLLLDEIGDMPI
GLQAKLLRVLQEGEIRPLGSNTVRKVNVRIIAATHRDLPALIAQGRFREDLYYRLAQFPV
ALPALRQRGEDIEPLARLFADNACEALKRARVAWSQAALASLSTHPFPGNIRQLKGFVER
AVLLSENGELLPEHFPFAPAPQGCVVGVTFRERMEQFERGLLLDYLHKSNGNRTVTARTL
GLSRRTLLYRLAHLDINSAQKGRC
NT seq 1515 nt   +upstreamnt  +downstreamnt
atgttcagctcggtccagcaccctttgggctacgcacagcagctgtgctcaatctatacg
catttgtcacaggcggctgacgacgccatgctgttgaatgattttgttcactcggcctcg
cgcctcagtggttgcgaactgagccaattgttcatgttcgacgtaacaccaggatgcctg
aaattaaaggcgcaggtgctggatgggaacattcgctcgggatcgccagataacgatgtc
actgaccacagtgcagagcacctgtttcagttcgttgtgcgcaatggcaagcctgtcagc
atcagtgacctgagttgcgcgctctacaacacgtgttttctgcccggcagcgagtcagcc
tggagatcgctggtgtgtgtcccattgatgaatcgggatcagactgtcgccgggctattg
gtctgtgcaagcagggaggtgatgtcactggaggttttcgcagcgtcactgggctctctg
gggacgttcgtggtgtcacagcaggccttgctcaggcgccatcagcccttggcctctgct
tcgatgaccgaaccgcagtctgccgtgtccagttacggattgatcagcaacagtgcagcg
atgcgccagacctgcgagcttgtcggcaaggtgctgcaaagtccctatacggtcttgctc
accggcgagaccggaaccggcaaggaggtcgttgcccgcgccatacacgatcatgggccg
cggcgatcgaaggcgttcgttgtgcagaactgcgcggcgtttcccgagagccttcttgag
agcgaattgttcggctaccgcaaaggcgcttttaccggcgctgatcgtgatcatcggggg
ctgttcgacgttgcgcatgaaggcacgcttctgctcgatgaaatcggcgacatgccgatc
gggctgcaggccaaactgcttcgtgttttgcaggagggagagatacgcccgcttggctcc
aacaccgtgcgcaaggtcaatgtgcgcatcatcgcagcgactcaccgggatctgccagcg
ctgatcgcgcaagggcggtttcgcgaggacctttactaccggctcgcgcagtttccggtc
gcgctaccggccctgcgtcagcgaggcgaagacattgaaccgctcgccaggcttttcgca
gacaacgcgtgcgaagcgctcaagcgtgcccgtgttgcctggtcgcaggccgctctcgca
tcgctttccacccatccattcccaggcaacatccggcaattgaagggctttgtcgagcga
gcggtcttgctcagtgagaacggagagctgttgcccgagcactttccttttgcgccagcg
cctcagggttgtgtggttggcgtgacgttccgcgagcgcatggagcagttcgaacgtggg
ctgttgcttgattatttgcataagagcaacggcaaccgaaccgtgacagcgagaaccttg
gggttatcgagacgtaccctgctttaccggctggcgcatctggatatcaacagcgcgcaa
aaaggacgctgctaa

DBGET integrated database retrieval system