Pseudomonas asturiensis: N015_15255
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Entry
N015_15255 CDS
T08470
Symbol
hcp
Name
(GenBank) type VI secretion system tube protein Hcp
KO
K11903
type VI secretion system secreted protein Hcp
Organism
past
Pseudomonas asturiensis
Pathway
past02025
Biofilm formation - Pseudomonas aeruginosa
past03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
past00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
N015_15255 (hcp)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
N015_15255 (hcp)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
past02044
]
N015_15255 (hcp)
Secretion system [BR:
past02044
]
Type VI secretion system
Imp/Vas secretion system core components
N015_15255 (hcp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T6SS_HCP
Motif
Other DBs
NCBI-ProteinID:
QHF03695
UniProt:
A0AA92F9A3
LinkDB
All DBs
Position
3412752..3413270
Genome browser
AA seq
172 aa
AA seq
DB search
MATPAYITITSETRGVLTLNAFTQESVGSIYQEGHTDQAMVQAFSHMITIPRDPQSGQPT
GQRVHAPLCITKIFDKSSPLLQQALTSGEQLSSVEIMWYRTSSEGKQEHYYTTLLEKAII
VEIKDYMYNCQDSATSQFTHLEDVHFAYRKITWTHEKASTSGSDDWGSPLSA
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
atggcaacacctgcttacataacgattactagcgaaacgcgtggcgttttgaccctgaat
gcttttactcaagagtctgtaggtagtatttatcaggaaggacataccgatcaggccatg
gtacaggccttcagccatatgataacgattcctcgggatccgcaatcaggccagcccacc
ggacaacgcgttcatgcacctctgtgcattaccaaaatcttcgataagtcatcgccatta
ctccaacaggcgctcacttccggcgaacaactgagctcggtcgagatcatgtggtaccgc
acctcaagcgaaggcaagcaggagcactactacacgacgctgctggagaaggcgatcatc
gtcgagatcaaggattacatgtacaactgccaagactcggccacgtcgcaattcactcac
cttgaagacgtacattttgcttatcgcaagatcacctggacccatgaaaaagccagcact
tcgggctctgacgattggggcagcccgctctcggcctga
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