Pectobacterium atrosepticum 21A: GZ59_15980
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Entry
GZ59_15980 CDS
T03293
Name
(GenBank) quorum-sensing transcriptional regulator
KO
K19734
LuxR family transcriptional regulator, quorum-sensing system regulator ExpR
Organism
pato
Pectobacterium atrosepticum 21A
Pathway
pato02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pato00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
GZ59_15980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pato03000
]
GZ59_15980
Transcription factors [BR:
pato03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
GZ59_15980
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Gene cluster
GFIT
Motif
Pfam:
Autoind_bind
GerE
Sigma70_r4_2
KH_dom-like
Motif
Other DBs
NCBI-ProteinID:
AIK13427
LinkDB
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Position
complement(1798629..1799366)
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AA seq
245 aa
AA seq
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MSVFCSDNEIINNTIKSYLGRKLKQYGDLKYAYMIMNKKNPSQVVIISNYPQEWVDTYKE
NNYQHIDPVILTAINTVSPFSWEDNIVINSKLKFSKIFNLSKEYDIVNGYTFVLHDNNNH
LAALSIMFEEHAPTDMESIVEENKDKLQMLLIAIHEKITTLYKEMTQSPQSKKQGDKEIF
SQRENEILYWASMGKTYPEIALILDIKISTVKFHIGNVVKKLGVLNAKHAIRLGVELQLI
KPEPL
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtattttgctctgacaatgaaattatcaataacacgataaaaagctatctcggc
cgaaagttaaagcagtatggcgacctgaaatacgcctatatgatcatgaataaaaagaac
ccgtctcaggttgtgatcatttcaaattacccgcaggaatgggttgatacctataaagaa
aataattatcagcatattgatccggttattttgacggcgataaacacagtctcgccattc
tcttgggaagacaacatcgttattaattctaagctgaaattctccaagatttttaatctg
tcaaaagaatacgatattgttaatggctacacctttgtcttgcatgacaacaataatcat
ctggcggcgctctcgattatgtttgaagaacatgcgccaacggatatggaaagtattgtt
gaggaaaataaagacaaactgcaaatgctgctcattgccattcatgagaaaatcaccacg
ctttacaaagagatgacacaaagccctcagagtaaaaaacaaggcgacaaagagatattc
tctcagcgtgaaaacgaaattctttactgggccagcatgggaaaaacctacccggaaatt
gcgctgattctggatatcaaaatcagcaccgttaaattccatattggtaatgtggtaaaa
aaactgggcgtgctgaatgccaaacatgccataagactgggtgtggaattacagctcatt
aaacctgagcctttataa
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