Pectobacterium atrosepticum 21A: GZ59_21410
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Entry
GZ59_21410 CDS
T03293
Symbol
ihfA
Name
(GenBank) integration host factor (IHF), DNA-binding protein subunit alpha
KO
K04764
integration host factor subunit alpha
Organism
pato
Pectobacterium atrosepticum 21A
Brite
KEGG Orthology (KO) [BR:
pato00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pato03032
]
GZ59_21410 (ihfA)
03036 Chromosome and associated proteins [BR:
pato03036
]
GZ59_21410 (ihfA)
03400 DNA repair and recombination proteins [BR:
pato03400
]
GZ59_21410 (ihfA)
DNA replication proteins [BR:
pato03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
GZ59_21410 (ihfA)
Chromosome and associated proteins [BR:
pato03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
GZ59_21410 (ihfA)
DNA repair and recombination proteins [BR:
pato03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
GZ59_21410 (ihfA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-DNA_bdg
Motif
Other DBs
NCBI-ProteinID:
AIK13951
LinkDB
All DBs
Position
2351725..2352021
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AA seq
98 aa
AA seq
DB search
MALTKAEMSEYLFEKLGLSKRDAKELVELFFEEVRRALENGEQVKLSGFGNFDLRDKNQR
PGRNPKTGEDIPITARRVVTFRPGQKLKSRVENASPKE
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atggcgcttactaaagctgaaatgtcagaatacctgtttgagaagctcgggctgagcaaa
cgggatgccaaagaactagtcgagctgttttttgaagaagttcgtcgcgctttggaaaat
ggcgagcaggtcaagttgtcaggttttggcaattttgatttgcgagacaagaaccaacgt
ccggggcgtaacccaaaaactggcgaagatattccgattacggcgcgccgtgtggtcacg
ttccgtccggggcaaaagctaaaaagtagggtagagaacgcctctcccaaagagtaa
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