Pseudomonas avellanae: BKM03_05670
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Entry
BKM03_05670 CDS
T05369
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
pavl
Pseudomonas avellanae
Pathway
pavl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pavl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BKM03_05670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pavl03019
]
BKM03_05670
Enzymes [BR:
pavl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
BKM03_05670
Messenger RNA biogenesis [BR:
pavl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
BKM03_05670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
AVB18788
LinkDB
All DBs
Position
complement(1101753..1103156)
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AA seq
467 aa
AA seq
DB search
MLKKLFQSFRSPLRKPQQHTRTTPEVLNSSQHSLQRSQFSRYAVNIVERLQNAGYQAYLV
GGCVRDMMLNITPKDFDVATSATPEQVRAEFRNARIIGRRFKLVHIHFGREIIEVATFRA
NHPQDDEEEDSNQSSRNESGRILRDNVYGTLEEDAQRRDFTINALYYDPVSERVLDYANG
VHDIRNRLIRLIGDPEQRYKEDPVRMLRAVRFAAKLDFGIEKHSAQPIRALAPMLRDIPS
ARLFEEVLKLFLSGYAAPTFEMLVDLELFEPLFPASSKALEYNPTYTHTLISNALINTDL
RIKQNKPVTPAFLFAALLWPALPAKVLRAQERGMPPIAAMQDAAHELIIEQCQRIAIPKR
FTLPIREIWDMQERLPRRSGKRADLLLDNSRFRAGYDFLLLRESAGEQTDGLGQWWTDYQ
DCNDSERRDMIRDLSNKPEAAGAAPRKRRRNSGAKRKRSSGEAQSGE
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagaagttgttccagtcatttcgttccccactgcgcaaaccgcagcaacatacg
cgtaccacgcctgaagtgctcaatagcagccagcattcgctgcaacgcagtcagttcagc
cgttatgccgtcaatattgtcgagcgtctgcaaaacgcaggctatcaggcctatctggtc
ggtggctgcgtacgcgacatgatgctcaatatcacgcccaaggattttgacgtcgccacc
agtgctacgccggaacaagtgcgtgccgagttccgcaatgcgcggatcatcggccgtcgg
ttcaagctggtgcatatccacttcggtcgtgaaatcatcgaagtggcgacgttccgcgcc
aatcatccacaggatgatgaagaagaggacagcaatcagtcatcgcgcaatgaaagcgga
cgcatcctgcgtgacaacgtttacggcacgcttgaagaagacgctcagcgtcgcgacttc
acgatcaatgcgctgtattacgacccggtcagcgagcgtgttctggattacgccaacggc
gtgcatgacatccgcaatcgtctgatccgcctgatcggcgacccggaacaacgctacaag
gaagacccggtgcgcatgctgcgtgccgtgcgcttcgcggccaaactggatttcggcatc
gaaaaacacagcgcccagccgatccgcgcactggcacccatgctgcgcgacattccatcg
gcgcgcctgttcgaagaggtgctcaagctgttcctctctggttatgccgcgccgacgttc
gagatgctggttgacctggagctgttcgagcccctgttcccggccagctcgaaggcgctg
gaatacaacccgacctacacccacacgctgatcagcaatgccctgatcaacaccgacctg
cgcatcaagcagaacaaaccggtcaccccggcgttcctgtttgccgccctgctctggcct
gcgctgccggccaaggtgctgcgtgcccaggaacgcggcatgccgccgattgcagccatg
caggacgccgctcacgagctgatcatcgagcagtgccagcgcatcgcgatccccaagcgc
ttcaccctgccgatccgcgaaatctgggacatgcaggagcgcctgccgcgtcgttcaggc
aaacgcgccgacctgttgctggacaactcgcgcttccgtgccggctacgacttcctgctg
ctacgcgaaagcgcgggcgagcagactgacggtctgggccaatggtggacggactatcag
gactgcaacgacagcgaacgtcgcgacatgattcgtgacctgagcaacaagccagaagcg
gccggcgctgctccgcgcaagcgtcgtcgcaacagtggcgccaaacgcaagcgcagcagt
ggcgaggcgcaaagcggtgagtaa
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