Pseudomonas avellanae: BKM03_16635
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Entry
BKM03_16635 CDS
T05369
Symbol
tssB
Name
(GenBank) type VI secretion system contractile sheath small subunit
KO
K11901
type VI secretion system protein ImpB
Organism
pavl
Pseudomonas avellanae
Pathway
pavl02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pavl00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
BKM03_16635 (tssB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pavl02044
]
BKM03_16635 (tssB)
Secretion system [BR:
pavl02044
]
Type VI secretion system
Imp/Vas secretion system core components
BKM03_16635 (tssB)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
T6SS_VipA
Motif
Other DBs
NCBI-ProteinID:
AVB20658
UniProt:
A0A6H3CZD8
LinkDB
All DBs
Position
complement(3468421..3468921)
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AA seq
166 aa
AA seq
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MAREGSVAPKERINVTFKPAIGGAQEEIELPLKLLVLGDFIQRVDERKLEDRKSISIDKN
NFDDVMAKQALELTLSVPNRLQVDSEVDDLTVSIRVASMKDFNPASLVEQIPELKKLMEL
RNALMSLKGPLGNTPAFRKAIEKVIADGESRDKVLDELGLGVVAQQ
NT seq
501 nt
NT seq
+upstream
nt +downstream
nt
atggccagagaaggctctgttgcgcccaaagaacggatcaacgtcacattcaaacccgcc
atcggcggcgcacaagaggaaatagagctgccgttgaagcttctggtcttgggcgacttt
atacagcgggtcgatgaacgaaagctcgaagatcgtaagtcgatcagtatcgacaagaat
aatttcgatgacgttatggccaagcaagcgctggaacttacgttgagcgtgcctaatcgt
ttgcaggttgacagtgaggttgatgacttgactgtcagcatcagagtggcctcgatgaag
gacttcaaccctgccagccttgtggagcaaattcccgaactgaaaaaactgatggaactg
cgtaatgcgctgatgtcgttaaaaggacctttgggtaatacgcctgcttttcgcaaggct
atcgagaaggtcattgctgacggggaatcacgtgacaaggtgctagacgagctcggcctt
ggtgtagtggcgcagcagtga
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